Evidence map›Paper›PMID 31201204›Full record

ArticleG3 (Bethesda, Md.)2019

isqg: A Binary Framework for

Fernando H Toledo, Paulino Pérez-Rodríguez, José Crossa, Juan Burgueño

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Fernando H ToledoInternational Maize and Wheat Improvement Center (CIMMYT), Km 45 Carretera México-Veracruz CP 56130, El Batán, Texcoco, Edo. de México, México and f.toledo@cgiar.org.
Paulino Pérez-RodríguezInternational Maize and Wheat Improvement Center (CIMMYT), Km 45 Carretera México-Veracruz CP 56130, El Batán, Texcoco, Edo. de México, México and.ORCID 0000-0002-3202-1784
José CrossaInternational Maize and Wheat Improvement Center (CIMMYT), Km 45 Carretera México-Veracruz CP 56130, El Batán, Texcoco, Edo. de México, México and.ORCID 0000-0001-9429-5855
Juan BurgueñoInternational Maize and Wheat Improvement Center (CIMMYT), Km 45 Carretera México-Veracruz CP 56130, El Batán, Texcoco, Edo. de México, México and.ORCID 0000-0002-1468-4867

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dna is the fundamental basis of genetic information, just as bits are for computers. Whenever computers are used to represent genetic data, the computational encoding must be efficient to allow the representation of processes driving the inheritance and variability. This is especially important across simulations in view of the increasing complexity and dimensions brought by genomics. This paper introduces a new binary representation of genetic information. Algorithms as bitwise operations that mimic the inheritance of a wide range of polymorphisms are also presented. Different kinds and mixtures of polymorphisms are discussed and exemplified. Proposed algorithms and data structures were implemented in C++ programming language and is available to end users in the R package "isqg" which is available at the R repository (cran). Supplementary data are available online.

Indexed as

SoftwareAlgorithmsComputational BiologyGenomicsAlgorithmsBiologyComputationalRecombinationSimulation

Identifiers

PMID31201204
PMCPMC6686941

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.