Evidence map›Paper›PMID 31200645›Full record

ArticleBMC plant biology2019

Interactional similarities and differences in the protein complex of PCNA and DNA replication factor C between rice and Arabidopsis.

Jie Qian, Yueyue Chen, Yaxing Xu, Xiufeng Zhang, Zhuang Kang, Jinxia Jiao, Jie Zhao

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Whole-Genome Sequencing and Analysis of Tumour-Forming Radish (International journal of molecular sciences · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jie QianState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yueyue ChenState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yaxing XuState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Xiufeng ZhangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Zhuang KangState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Jinxia JiaoState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Jie ZhaoState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China. jzhao@whu.edu.cn.
Wuhan University · CN

Funding

National Natural Science Foundation of China 31370348, 31670312, 31870303
6 · The paper itself

Abstract

backgroundProliferating cell nuclear antigen (PCNA), a conserved trimeric ring complex, is loaded onto replication fork through a hetero-pentameric AAA+ ATPase complex termed replication factor C (RFC) to maintain genome stability. Although architectures of PCNA-RFC complex in yeast have been revealed, the functions of PCNA and protein-protein interactions of PCNA-RFC complex in higher plants are not very clear. Here, essential regions mediating interactions between PCNA and RFC subunits in Arabidopsis and rice were investigated via yeast-two-hybrid method and bimolecular fluorescence complementation techniques.

resultsWe observed that OsPCNA could interact with all OsRFC subunits, while protein-protein interactions only exist between Arabidopsis RFC2/3/4/5 and AtPCNA1/2. The truncated analyses indicated that the C-terminal of Arabidopsis RFC2/3/4/5 and rice RFC1/2 is essential for binding PCNA while the region of rice RFC3/4/5 mediating interaction with PCNA distributed both at the N- and C-terminal. On the other hand, we found that the C- and N-terminal of Arabidopsis and rice PCNA contribute equally to PCNA-PCNA interaction, and the interdomain connecting loop (IDCL) domain and C-terminal of PCNAs are indispensable for interacting RFC subunits.

conclusionsThese results indicated that Arabidopsis and rice PCNAs are highly conserved in sequence, structure and pattern of interacting with other PCNA monomer. Nevertheless, there are also significant differences between the Arabidopsis and rice RFC subunits in binding PCNA. Taken together, our results could be helpful for revealing the biological functions of plant RFC-PCNA complex.

Indexed as

ArabidopsisConserved SequenceOryzaPlant ProteinsProliferating Cell Nuclear AntigenReplication Protein CPlant ProteinsProliferating Cell Nuclear AntigenReplication Protein CArabidopsis thalianaOryza sativaProliferating cell nuclear antigenProtein-protein interactionReplication factor C

Identifiers

PMID31200645
PMCPMC6570896
OpenAlexW2951009608

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.