Evidence map›Paper›PMID 31198821›Full record

ArticleBone reports2019

Improved method for isolating high-quality RNA from mouse bone with RNA

Kim B Pedersen, Ashlee Williams, James Watt, Martin J Ronis

Abstract read
In one paragraph

Article in Bone reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Aging Exacerbates Binge Ethanol-Mediated Bone Toxicity in Mice.Alcohol, clinical & experimental research · 2026
    Article
  3. Article
  4. Article
  5. Myeloid deficiency of heparan sulfate 6-O-endosulfatases impairs bone marrow hematopoiesis.Matrix biology : journal of the International Society for Matrix Biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Canine and murine models of osteosarcoma.Veterinary pathology · 2022
    Review
  16. Article
  17. Article
  18. An improved method for isolation of RNA from rat femur.International journal of biochemistry and molecular biology · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kim B PedersenDepartment of Pharmacology & Experimental Therapeutics, Louisiana State University Health Sciences Center (LSUHSC), New Orleans, LA, United States of America.
Ashlee WilliamsDepartment of Pharmacology & Experimental Therapeutics, Louisiana State University Health Sciences Center (LSUHSC), New Orleans, LA, United States of America.
James WattDepartment of Pharmacology & Experimental Therapeutics, Louisiana State University Health Sciences Center (LSUHSC), New Orleans, LA, United States of America.
Martin J RonisDepartment of Pharmacology & Experimental Therapeutics, Louisiana State University Health Sciences Center (LSUHSC), New Orleans, LA, United States of America.

Funding

The role of oxidative stress in alcohol-induced osteopeniaR37AA018282 · NIAAA · LSU HEALTH SCIENCES CENTER · PI RONIS, MARTIN J J · 2016 to 2025
$4.7M
LSUHSC-New Orleans Postbaccalaureate Research Education Program in Biomedical SciencesR25GM121189 · NIGMS · LSU HEALTH SCIENCES CENTER · PI HARRISON-BERNARD, LISA M. · 2017 to 2021
$1.4M
Identifying the role of reactive oxygen species in alcohol-induced murine growth plate pathologyF32AA026480 · NIAAA · LSU HEALTH SCIENCES CENTER · PI WATT, JAMES DOUGLAS · 2017 to 2018
$118k
NIAAA NIH HHS F32 AA026480NIAAA NIH HHS R37 AA018282NIGMS NIH HHS R25 GM121189
6 · The paper itself

Abstract

Accurate gene expression analysis of bone requires the ability to isolate RNA of good quality. Isolation of intact RNA from frozen bone tissue is problematic since RNA rapidly becomes degraded after thawing. Since we are interested in assessing gene expression from both bone marrow and mineralized bone, we aimed to develop improved simple, robust and statistically validated methods providing high-quality RNA from both mouse femur shaft and femur marrow. RNA integrity was quantified by the RNA Integrity Number (RIN) measured on a TapeStation. While the RNA stabilization reagent RNA

Indexed as

CT, Cycle threshold valueqRT-PCR, Quantitative RT-PCRRIN, RNA Integrity NumberRNA integrity numberRNAlaterRNA qualityTapeStation

Identifiers

PMID31198821
PMCPMC6558217

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.