Evidence map›Paper›PMID 31198643›Full record

ArticlePeerJ2019

Composition and dynamics of the bacterial communities present in the post-slaughter environment of farmed Atlantic salmon (

Ása Jacobsen, Svein-Ole Mikalsen, Hóraldur Joensen, Jonhard Eysturskarð

Open access · goldAbstract read
In one paragraph

Article in PeerJ, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ása JacobsenFiskaaling, Aquaculture Research Station of the Faroes, Við Áir, Hvalvík, The Faroe Islands.
Svein-Ole MikalsenDepartment of Science and Technology, University of the Faroe Islands, Tórshavn, The Faroe Islands.
Hóraldur JoensenDepartment of Science and Technology, University of the Faroe Islands, Tórshavn, The Faroe Islands.
Jonhard EysturskarðFiskaaling, Aquaculture Research Station of the Faroes, Við Áir, Hvalvík, The Faroe Islands.
University of the Faroe Islands · FO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMicrobial analyses performed in connection with the post-slaughter environment of farmed Atlantic salmon (

methodsSamples were taken from the digestive system harvested from 15 salmon immediately after slaughter. Another 17 salmon were taken from the processing line just before the final cleaning stage; of these eight were distributed in three iced storage boxes while the other nine were rinsed an extra time with industrial water before being distributed into another three storage boxes. In the following 6 days, samples were taken of skin mucus, liquids in the abdominal cavity and the storage ice. The compositions of the bacterial communities were analyzed by next-generation sequencing and gelatinase activity was measured in all samples except the storage ice.

resultsThe bacterial communities in the digestive tract samples were dominated by the family

conclusionsThe study showed a correlation between intestinal fluids and bacteria left in the abdominal cavity and gelatinase activity. This suggested that intestinal fluids and/or bacteria could enhance the degradation of connective tissue in the abdominal cavity and hence negatively affect the fillet quality. In addition, the study provided general knowledge of the composition and dynamics of bacterial communities present.

Indexed as

AquacultureAtlantic salmonBacterial communitiesGelatinase activityPost-slaughter

Identifiers

PMID31198643
PMCPMC6555393
OpenAlexW2948568980

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.