Evidence map›Paper›PMID 31197182›Full record

ArticleNature communications2019

Kistamicin biosynthesis reveals the biosynthetic requirements for production of highly crosslinked glycopeptide antibiotics.

Anja Greule, Thierry Izoré, Dumitrita Iftime, Julien Tailhades, Melanie Schoppet, Yongwei Zhao, Madeleine Peschke, Iftekhar Ahmed, Andreas Kulik, Martina Adamek and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Anja GreuleDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.ORCID http://orcid.org/0000-0001-7778-9626
Thierry IzoréDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Dumitrita IftimeInterfaculty Institute of Microbiology and Infection Medicine Tübingen, Microbiology/Biotechnology, University of Tübingen, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Julien TailhadesDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Melanie SchoppetDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Yongwei ZhaoDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Madeleine PeschkeDepartment of Biomolecular Mechanisms, Max Planck Institute for Medical Research, Jahnstrasse 29, 69120, Heidelberg, Germany.
Iftekhar AhmedDepartment of Chemistry, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-8708-4379
Andreas KulikInterfaculty Institute of Microbiology and Infection Medicine Tübingen, Microbiology/Biotechnology, University of Tübingen, Auf der Morgenstelle 28, 72076, Tübingen, Germany.ORCID http://orcid.org/0000-0002-6914-7313
Martina AdamekInterfaculty Institute of Microbiology and Infection Medicine Tübingen, Microbiology/Biotechnology, University of Tübingen, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Robert J A GoodeDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.ORCID http://orcid.org/0000-0002-3028-8928
Ralf B SchittenhelmDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia.
Joe A KaczmarskiResearch School of Chemistry, The Australian National University, Acton, ACT, 2601, Australia.
Colin J JacksonResearch School of Chemistry, The Australian National University, Acton, ACT, 2601, Australia.ORCID http://orcid.org/0000-0001-6150-3822
Nadine ZiemertInterfaculty Institute of Microbiology and Infection Medicine Tübingen, Microbiology/Biotechnology, University of Tübingen, Auf der Morgenstelle 28, 72076, Tübingen, Germany.
Elizabeth H KrenskeDepartment of Chemistry, The University of Queensland, St Lucia, QLD, 4072, Australia.
James J De VossDepartment of Chemistry, The University of Queensland, St Lucia, QLD, 4072, Australia.ORCID http://orcid.org/0000-0002-2659-5140
Evi StegmannInterfaculty Institute of Microbiology and Infection Medicine Tübingen, Microbiology/Biotechnology, University of Tübingen, Auf der Morgenstelle 28, 72076, Tübingen, Germany. evi.stegmann@biotech.uni-tuebingen.de.
Max J CryleDepartment of Biochemistry and Molecular Biology, The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC, 3800, Australia. max.cryle@monash.edu.ORCID http://orcid.org/0000-0002-9739-6157

Funding

Department of Education and Training | Australian Research Council (ARC) DP170102220Department of Education and Training | Australian Research Council (ARC) DP180103047Department of Education and Training | Australian Research Council (ARC) FT120100632Department of Health | National Health and Medical Research Council (NHMRC) APP1140619Deutsche Forschungsgemeinschaft (German Research Foundation) TP-A03
6 · The paper itself

Abstract

Kistamicin is a divergent member of the glycopeptide antibiotics, a structurally complex class of important, clinically relevant antibiotics often used as the last resort against resistant bacteria. The extensively crosslinked structure of these antibiotics that is essential for their activity makes their chemical synthesis highly challenging and limits their production to bacterial fermentation. Kistamicin contains three crosslinks, including an unusual 15-membered A-O-B ring, despite the presence of only two Cytochrome P450 Oxy enzymes thought to catalyse formation of such crosslinks within the biosynthetic gene cluster. In this study, we characterise the kistamicin cyclisation pathway, showing that the two Oxy enzymes are responsible for these crosslinks within kistamicin and that they function through interactions with the X-domain, unique to glycopeptide antibiotic biosynthesis. We also show that the kistamicin OxyC enzyme is a promiscuous biocatalyst, able to install multiple crosslinks into peptides containing phenolic amino acids.

Indexed as

ActinobacteriaAnti-Bacterial AgentsBacterial ProteinsBiocatalysisBiosynthetic PathwaysCyclizationCytochrome P-450 Enzyme SystemGlycopeptidesMultigene FamilyPeptidesAnti-Bacterial AgentsBacterial ProteinsCytochrome P-450 Enzyme SystemGlycopeptideskistamicin APeptides

Identifiers

PMID31197182
PMCPMC6565677

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.