Evidence map›Paper›PMID 31197171›Full record

ArticleScientific data2019

Hypothalamus-pituitary-gonad axis transcriptome profiling for sex differentiation in Acipenser sinensis.

Hejun Du, Jianbo Jian, Binzhong Wang, Xueqing Liu, Jianwei Chen, Kan Xiao, Jinquan Xia, Jing Yang, Yong Gao, Lei Chen

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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  7. Siberian sturgeon multi-tissue reference transcriptome database.Database : the journal of biological databases and curation · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Hejun DuHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China. du_hejun@ctg.com.cn.
Jianbo JianBGI genomics, BGI-Shenzhen, Shenzhen, Guangdong, 518083, China.
Binzhong WangHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China.
Xueqing LiuHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China.
Jianwei ChenBGI genomics, BGI-Shenzhen, Shenzhen, Guangdong, 518083, China.ORCID http://orcid.org/0000-0003-2332-4609
Kan XiaoHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China.
Jinquan XiaBGI genomics, BGI-Shenzhen, Shenzhen, Guangdong, 518083, China.
Jing YangHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China.
Yong GaoHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China.
Lei ChenHubei Key Laboratory of Three Gorges Project for Conservation of Fishes, Yichang, Hubei, 443100, China. chen_lei@ctg.com.cn.
China Three Gorges Corporation (China) · CNBGI Group (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chinese sturgeon (Acipenser sinensis), a critically endangered Acipenseridae family member, is one of the largest anadromous, native fish in China. Numerous research programmes and protection agencies have focused on breeding and preserving this endangered species. However, available information is limited on the different stages of sex development, especially on the reproductive regulation of the hypothalamus-pituitary-gonad (HPG) axis of A. sinensis. To unravel the mechanism of gene interactions during sex differentiation and gonad development of A. sinensis, we performed transcriptome sequencing using HPG samples from male and female A. sinensis in two developmental stages. In this study, 271.19 Gb high-quality transcriptome data were obtained from 45 samples belonging to 15 individuals (six in stage I, six males and three females in stage II). These transcriptomic data will help us understand the reproductive regulation of the HPG axis in the development stages of A. sinensis and provide important reference data for genomic and genetic studies in A. sinensis and related species.

Indexed as

Endangered SpeciesGene Expression ProfilingAnimalsFemaleFishesGenomeHypothalamo-Hypophyseal SystemMaleSex DifferentiationTranscriptome

Identifiers

PMID31197171
PMCPMC6565624
OpenAlexW2948770749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.