Evidence map›Paper›PMID 31197135›Full record

ArticleNature communications2019

Ab initio nonrigid X-ray nanotomography.

Michal Odstrcil, Mirko Holler, Jörg Raabe, Alessandro Sepe, Xiaoyuan Sheng, Silvia Vignolini, Christian G Schroer, Manuel Guizar-Sicairos

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Environmental control for X-ray nanotomography.Journal of synchrotron radiation · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Michal OdstrcilPaul Scherrer Institut, CH-5232, Villigen PSI, Switzerland.ORCID http://orcid.org/0000-0002-0588-295X
Mirko HollerPaul Scherrer Institut, CH-5232, Villigen PSI, Switzerland.ORCID http://orcid.org/0000-0001-8141-0148
Jörg RaabePaul Scherrer Institut, CH-5232, Villigen PSI, Switzerland.ORCID http://orcid.org/0000-0002-2071-6896
Alessandro SepeBig Data Science Center, Shanghai Synchrotron Radiation Facility, Zhangjiang Laboratory, 239 Zhangheng Road, Pudong, 201204, Shanghai, China.
Xiaoyuan ShengAdolphe Merkle Institute, University of Fribourg, Chemin des Verdiers 4, CH-1700, Fribourg, Switzerland.
Silvia VignoliniDepartment of Chemistry, University of Cambridge, Lensfield Road, CB2 1EW, Cambridge, UK.ORCID http://orcid.org/0000-0003-0664-1418
Christian G SchroerDeutsches Elektronen-Synchrotron DESY, Notkestr. 85, 22607, Hamburg, Germany.ORCID http://orcid.org/0000-0002-9759-1200
Manuel Guizar-SicairosPaul Scherrer Institut, CH-5232, Villigen PSI, Switzerland. manuel.guizar-sicairos@psi.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reaching the full potential of X-ray nanotomography, in particular for biological samples, is limited by many factors, of which one of the most serious is radiation damage. Although sample deformation caused by radiation damage can be partly mitigated by cryogenic protection, it is still present in these conditions and, as we exemplify here using a specimen extracted from scales of the Cyphochilus beetle, it will pose a limit to the achievable imaging resolution. We demonstrate a generalized tomographic model, which optimally follows the sample morphological changes and attempts to recover the original sample structure close to the ideal, damage-free reconstruction. Whereas our demonstration was performed using ptychographic X-ray tomography, the method can be adopted for any tomographic imaging modality. Our application demonstrates improved reconstruction quality of radiation-sensitive samples, which will be of increasing relevance with the higher brightness of 4th generation synchrotron sources.

Indexed as

AnimalsAnimal ScalesColeopteraImaging, Three-DimensionalNanotechnologyTomography, X-Ray Computed

Identifiers

PMID31197135
PMCPMC6565693

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.