Evidence map›Paper›PMID 31195143›Full record

ReviewBiochimica et biophysica acta. Proteins and proteomics2019

Bacterial functional amyloids: Order from disorder.

Neha Jain, Matthew R Chapman

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta. Proteins and proteomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. mSystems · 2023
    Article
  10. Review
  11. CRISPRiFrontiers in nutrition · 2022
    Article
  12. Structure and Conservation of Amyloid Spines From theFrontiers in molecular biosciences · 2022
    Article
  13. Article
  14. The protein disorder cycle.Biophysical reviews · 2021
    Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Neha JainBiological and Life Sciences, School of Arts and Sciences, Ahmedabad University, Ahmedabad, Gujarat, India. Electronic address: njain@iitj.ac.in.
Matthew R ChapmanDepartment of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI, USA. Electronic address: chapmanm@umich.edu.
Ahmedabad University · INUniversity of Michigan–Ann Arbor · US

Funding

Protein and Chemical Modulation of Curli Amyloid BiogenesisR01GM118651 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Matthew Richard Chapman · 2016 to 2026
$3.0M
Transthyretin as a generic inhibitor of amyloid and amyloid-associated biofilm infectionsR21AI137535 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHAPMAN, MATTHEW RICHARD · 2018 to 2019
$489k
NIAID NIH HHS R21 AI137535NIGMS NIH HHS R01 GM118651
6 · The paper itself

Abstract

The discovery of intrinsic disorderness in proteins and peptide regions has given a new and useful insight into the working of biological systems. Due to enormous plasticity and heterogeneity, intrinsically disordered proteins or regions in proteins can perform myriad of functions. The flexibility in disordered proteins allows them to undergo conformation transition to form homopolymers of proteins called amyloids. Amyloids are highly structured protein aggregates associated with many neurodegenerative diseases. However, amyloids have gained much appreciation in recent years due to their functional roles. A functional amyloid fiber called curli is assembled on the bacterial cell surface as a part of the extracellular matrix during biofilm formation. The extracellular matrix that encases cells in a biofilm protects the cells and provides resistance against many environmental stresses. Several of the Csg (curli specific genes) proteins that are required for curli amyloid assembly are predicted to be intrinsically disordered. Therefore, curli amyloid formation is highly orchestrated so that these intrinsically disordered proteins do not inappropriately aggregate at the wrong time or place. The curli proteins are compartmentalized and there are chaperone-like proteins that prevent inappropriate aggregation and allow the controlled assembly of curli amyloids. Here we review the biogenesis of curli amyloids and the role that intrinsically disordered proteins play in the process.

Indexed as

Bacterial Physiological PhenomenaProtein AggregatesAmyloidBacteriaBacterial ProteinsBiofilmsAmyloidBacterial ProteinsCrl protein, BacteriaProtein AggregatesBiofilmsCurliFunctional amyloidsIntrinsically disordered proteinsPhase transition

Identifiers

PMID31195143
PMCPMC6661199
OpenAlexW2950802278

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.