ArticleFrontiers in genetics2019
Comparative Genomic Analysis Reveals Extensive Genetic Variations of WRKYs in Solanaceae and Functional Variations of CaWRKYs in Pepper.
Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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10 citing papers in PubMed.
- Phylogenetic relationship of WRKY transcription factors inPlant signaling & behavior · 2025Article
- Genome-Wide Identification and Characterization of the Phytochrome Gene Family in Peanut.Genes · 2023Article
- Whole-genome identification and expression profiling of growth-regulating factor (GRF) and GRF-interacting factor (GIF) gene families in Panax ginseng.BMC genomics · 2023Article
- Identification and analysis of BAHD superfamily related to malonyl ginsenoside biosynthesis inFrontiers in plant science · 2023Article
- Comprehensive Genomic Survey, Structural Classification, and Expression Analysis of WRKY Transcription Factor Family in Rhododendron simsiiPlants (Basel, Switzerland) · 2022Article
- Characterization and expression analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022Article
- Genome-wide identification of the Liriodendron chinense WRKY gene family and its diverse roles in response to multiple abiotic stress.BMC plant biology · 2022Article
- Article
- Genome-wide characterization and analysis of WRKY transcription factors in Panax ginseng.BMC genomics · 2021Article
- WRKY genes family study reveals tissue-specific and stress-responsive TFs in wild potato species.Scientific reports · 2020Article
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9 authors.
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Abstract
As a conserved protein family, WRKY has been shown to be involved in multiple biological processes in plants. However, the mechanism of functional diversity for WRKYs in pepper has not been well elucidated. Here, a total of 223 WRKY members from solanaceae crops including pepper, tomato and potato, were analyzed using comparative genomics. A tremendous genetic variation among WRKY members of different solanaceous plants or groups was demonstrated by the comparison of some WRKY features, including number/size, group constitution, gene structure, and domain composition. The phylogenetic analysis showed that except for the known WRKY groups (I, IIa/b/c/d/e and III), two extra WRKY subgroups specifically existed in solanaceous plants, which were named group IIf and group IIg in this study, and their genetic variations were also revealed by the characteristics of some group IIf and IIg WRKYs. Except for the extensive genetic variations, certain degrees of conservatism for solanaceae WRKYs were also revealed. Moreover, the variant zinc-finger structure (CX
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