Evidence map›Paper›PMID 31189934›Full record

ArticleScientific reports2019

Population divergence and gene flow in two East Asian shorebirds on the verge of speciation.

Keren R Sadanandan, Clemens Küpper, Gabriel W Low, Cheng-Te Yao, Yue Li, Tao Xu, Frank E Rheindt, Shaoyuan Wu

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Keren R SadanandanNational University of Singapore, Department of Biological Sciences, Singapore, 117558, Singapore.
Clemens KüpperMax Planck Institute for Ornithology, 82319, Seewiesen, Germany.
Gabriel W LowNational University of Singapore, Department of Biological Sciences, Singapore, 117558, Singapore.
Cheng-Te YaoEndemic Species Research Institute, High-altitude Experimental Station, Chi-chi, 55244, Taiwan.
Yue LiJiangsu Normal University, School of Life Sciences, Jiangsu Key Laboratory of Phylogenomics and Comparative Genomics, Xuzhou, 221116, China.
Tao XuJiangsu Normal University, School of Life Sciences, Jiangsu Key Laboratory of Phylogenomics and Comparative Genomics, Xuzhou, 221116, China.
Frank E RheindtNational University of Singapore, Department of Biological Sciences, Singapore, 117558, Singapore. dbsrfe@nus.edu.sg.ORCID http://orcid.org/0000-0002-4575-1487
Shaoyuan WuJiangsu Normal University, School of Life Sciences, Jiangsu Key Laboratory of Phylogenomics and Comparative Genomics, Xuzhou, 221116, China. shaoyuanwu@outlook.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic isolation of populations over evolutionary time leads to the formation of independent species. We examined a pair of shorebirds - the Kentish Plover Charadrius alexandrinus and the enigmatic White-faced Plover C. dealbatus - which display strong plumage differentiation, yet show minimal genetic divergence based on previous mitochondrial and microsatellite work. Two scenarios may lead to this situation: (1) they represent clinal or poorly diverged populations with limited genomic differentiation despite substantial plumage variation, or (2) they are diverging taxa at the cusp of speciation, with ongoing limited gene flow obliterating signals of differentiation in traditional genetic markers. We compared the genotypes of 98 plovers (59 Kentish Plovers, 35 White-faced Plovers and 4 genomic hybrids) sampled in eastern Asia and Europe using ddRADSeq to harvest over 8000 genome-wide SNPs. In contrast to previous studies, our analyses revealed two well defined genomic clusters, with limited hybridization and a narrow contact zone. We also uncovered significant differences in bill length and further sex-specific differences in size, which may signal differences in mate choice between Kentish and White-faced Plovers. Our results support the hypothesis that this shorebird duo is on the verge of speciation.

Indexed as

Gene FlowGenomePolymorphism, Single NucleotideSex CharacteristicsAnimalsCharadriiformesFemaleGenome-Wide Association StudyMale

Identifiers

PMID31189934
PMCPMC6561938

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.