Evidence map›Paper›PMID 31189714›Full record

ArticleJournal of virology2019

HIV Diversity and Genetic Compartmentalization in Blood and Testes during Suppressive Antiretroviral Therapy.

Rachel L Miller, Rosalie Ponte, Bradley R Jones, Natalie N Kinloch, Fredrick H Omondi, Mohammad-Ali Jenabian, Franck P Dupuy, Remi Fromentin, Pierre Brassard, Vikram Mehraj and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 46 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Review
  5. Article
  6. HIV reservoirs in lymphomagenesis: hidden driver in the era of viral suppression?Microbiology and molecular biology reviews : MMBR · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. HIV and Drug-Resistant Subtypes.Microorganisms · 2023
    Review
  12. Article
  13. Landscape of Human Immunodeficiency Virus Neutralization Susceptibilities Across Tissue Reservoirs.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Pharmacology of HIV Cure: Site of Action.Clinical pharmacology and therapeutics · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 1 country.

Rachel L Miller *Faculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia, Canada.
Rosalie Ponte *Research Institute, McGill University Health Centre, Montréal, Quebec, Canada.
Bradley R JonesBritish Columbia Centre for Excellence in HIV/AIDS, Vancouver, British Columbia, Canada.
Natalie N KinlochFaculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia, Canada.
Fredrick H OmondiFaculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia, Canada.
Mohammad-Ali JenabianDepartment of Biological Sciences, Université du Québec à Montréal, Montréal, Quebec, Canada.
Franck P DupuyResearch Institute, McGill University Health Centre, Montréal, Quebec, Canada.
Remi FromentinCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Quebec, Canada.
Pierre BrassardThe Metropolitan Centre for Plastic Surgery, Montréal, Quebec, Canada.
Vikram MehrajResearch Institute, McGill University Health Centre, Montréal, Quebec, Canada.
Nicolas ChomontCentre de Recherche du Centre Hospitalier de l'Université de Montréal, Montréal, Quebec, Canada.
Art F Y PoonDepartment of Pathology & Laboratory Medicine, Western University, London, Ontario, Canada.
Jeffrey B JoyBritish Columbia Centre for Excellence in HIV/AIDS, Vancouver, British Columbia, Canada.
Zabrina L Brumme *Faculty of Health Sciences, Simon Fraser University, Burnaby, British Columbia, Canada zbrumme@sfu.ca.ORCID 0000-0002-8157-1037
Jean-Pierre Routy *
ORCHID Study Group
McGill University Health Centre · CASimon Fraser University · CACentre Hospitalier de l’Université de Montréal · CAAIDS Vancouver · CAUniversité du Québec à Montréal · CAUniversity of British Columbia · CAWestern University · CA

Funding

BELIEVE: Bench to Bed Enhanced Lymphocyte Infusions to Engineer Viral EradicationUM1AI126617 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI JONES, R. BRAD, NIXON, DOUGLAS F · 2016 to 2020
$28.1M
Genetics, dynamics and fitness of the HIV-1 latent reservoirR21AI127029 · NIAID · SIMON FRASER UNIVERSITY · PI BROCKMAN, MARK ALAN, BRUMME, ZABRINA · 2018 to 2019
$300k
CIHR FRN-130609CIHR HB1-164063CIHR HB2-164064CIHR HIG-133050CIHR PJT-155990CIHR PJT-159625NIAID NIH HHS R21 AI127029NIAID NIH HHS UM1 AI126617Wellcome TrustWellcome Trust 107752/Z/15/Z
6 · The paper itself

Abstract

HIV's ability to persist during suppressive antiretroviral therapy is the main barrier to cure. Immune-privileged tissues, such as the testes, may constitute distinctive sites of HIV persistence, but this has been challenging to study in humans. We analyzed the proviral burden and genetics in the blood and testes of 10 individuals on suppressive therapy who underwent elective gender-affirming surgery. HIV DNA levels in matched blood and testes were quantified by quantitative PCR, and subgenomic proviral sequences (

Indexed as

Anti-Retroviral AgentsCase-Control StudiesClonal EvolutionElective Surgical ProceduresGender-Affirming SurgeryGenetic VariationHIV-1HIV InfectionsHumansMalenef Gene Products, Human Immunodeficiency VirusPhylogenySequence Analysis, RNATestisAnti-Retroviral Agentsnef Gene Products, Human Immunodeficiency Virusclonal expansiondiversitygenetic compartmentalizationHIVreservoirtestes

Identifiers

PMID31189714
PMCPMC6694813
OpenAlexW2952783023

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.