Evidence map›Paper›PMID 31189664›Full record

ArticleDevelopment (Cambridge, England)2019

Regionally specified human pluripotent stem cell-derived astrocytes exhibit different molecular signatures and functional properties.

Robert A Bradley, Jack Shireman, Caya McFalls, Jeea Choi, Scott G Canfield, Yi Dong, Katie Liu, Brianne Lisota, Jeffery R Jones, Andrew Petersen and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it, 65 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 2 countries.

Robert A BradleyDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.ORCID 0000-0001-7734-7721
Jack ShiremanDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Caya McFallsDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Jeea ChoiDepartment of Statistics, University of Wisconsin - Madison, Madison, WI 53705, USA.
Scott G CanfieldDepartment of Chemical and Biological Engineering, University of Wisconsin - Madison, Madison, WI 53705, USA.
Yi DongDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Katie LiuDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Brianne LisotaDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Jeffery R JonesDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Andrew PetersenDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Anita BhattacharyyaDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA.
Sean P PalecekDepartment of Chemical and Biological Engineering, University of Wisconsin - Madison, Madison, WI 53705, USA.
Eric V ShustaDepartment of Chemical and Biological Engineering, University of Wisconsin - Madison, Madison, WI 53705, USA.
Christina KendziorskiDepartment of Biostatistics and Medical Informatics, University of Wisconsin - Madison, Madison, WI 53792, USA.
Su-Chun ZhangDepartment of Neuroscience, Waisman Center, University of Wisconsin - Madison, Madison, WI 53705, USA suchun.zhang@wisc.edu.ORCID 0000-0003-2670-6426
University of Wisconsin–Madison · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI MAILICK, MARSHA RUTH · 1985 to 2015
$25.2M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
Summer Research ExperienceP50MH100031 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI KALIN, NED H · 2013 to 2017
$10.4M
Waisman Intellectual and Developmental Disabilities Research Center Down Syndrome RegistryU54HD090256 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI POLLAK, SETH D · 2016 to 2020
$6.0M
Patient-derived iPS cells as model systems for AxDP01HD076892 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI NEDERGAARD, MAIKEN · 2014 to 2018
$6.0M
Statistical methods for spatial RNA sequencing experimentsR01GM102756 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KENDZIORSKI, CHRISTINA · 2012 to 2024
$3.8M
Reconstruction and Regulation of Neural Circuitry by Human NeuronsR01NS096282 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ZHANG, SU-CHUN · 2017 to 2021
$1.7M
Transgenic Human Stem Cell Lines and ReagentsR24NS086604 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI ZHANG, SU-CHUN · 2014 to 2017
$1.1M
Development and function of human astrocytesR01MH099587 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI ZHANG, SU-CHUN · 2013 to 2015
$858k
NICHD NIH HHS P01 HD076892NICHD NIH HHS P30 HD003352NICHD NIH HHS U54 HD090256NIGMS NIH HHS R01 GM102756NIGMS NIH HHS T32 GM007215NIMH NIH HHS P50 MH100031NIMH NIH HHS R01 MH099587NINDS NIH HHS R01 NS096282NINDS NIH HHS R24 NS086604
6 · The paper itself

Abstract

Astrocytes display diverse morphologies in different regions of the central nervous system. Whether astrocyte diversity is attributable to developmental processes and bears functional consequences, especially in humans, is unknown. RNA-seq of human pluripotent stem cell-derived regional astrocytes revealed distinct transcript profiles, suggesting differential functional properties. This was confirmed by differential calcium signaling as well as effects on neurite growth and blood-brain barrier formation. Distinct transcriptional profiles and functional properties of human astrocytes generated from regionally specified neural progenitors under the same conditions strongly implicate the developmental impact on astrocyte diversity. These findings provide a rationale for renewed examination of regional astrocytes and their role in the pathogenesis of psychiatric and neurological disorders.

Indexed as

TranscriptomeAstrocytesBase SequenceBiomarkersCell DifferentiationCells, CulturedCerebral CortexGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansInduced Pluripotent Stem CellsNeural Stem CellsNeurogenesisOrgan SpecificityPluripotent Stem CellsProsencephalonBiomarkersAstrocyte heterogeneityBlood-brain barrierHuman astrocyte developmentNeuron-glia interactionRNA-seq

Identifiers

PMID31189664
PMCPMC6633609
OpenAlexW2949744102

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.