Evidence map›Paper›PMID 31189077›Full record

ArticleMatrix biology : journal of the International Society for Matrix Biology2020

Transcriptomic analysis reveals that BMP4 sensitizes glioblastoma tumor-initiating cells to mechanical cues.

Jasmine H Hughes, Jeanette M Ewy, Joseph Chen, Sophie Y Wong, Kevin M Tharp, Andreas Stahl, Sanjay Kumar

Open access · greenAbstract read
In one paragraph

Article in Matrix biology : journal of the International Society for Matrix Biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Bioengineered Models to Study Microenvironmental Regulation of Glioblastoma Metabolism.Journal of neuropathology and experimental neurology · 2021
    Review
  5. Article
  6. Review
  7. Review
  8. Article
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  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Jasmine H HughesUC Berkeley - UCSF Graduate Program in Bioengineering; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA.
Jeanette M EwyDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA.
Joseph ChenDepartment of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA.
Sophie Y WongUC Berkeley - UCSF Graduate Program in Bioengineering; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA.
Kevin M TharpCenter for Bioengineering and Tissue Regeneration, Department of Surgery, University of California San Francisco, San Francisco, CA 94720, USA.
Andreas StahlUC Berkeley - UCSF Graduate Program in Bioengineering; Department of Nutritional Sciences and Toxicology, University of California, Berkeley, Berkeley, CA 94720, USA.
Sanjay KumarUC Berkeley - UCSF Graduate Program in Bioengineering; Department of Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Chemical and Biomolecular Engineering, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: skumar@berkeley.edu.
University of California, Berkeley · USBioengineering Center · RUUniversity of California, San Francisco · US

Funding

Biophysical Control of Cell Form and Function by Single Actomyosin Stress Fibers: Instrument SupplementR01GM122375 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI KUMAR, SANJAY · 2017 to 2025
$2.7M
Cellular mechanobiology and engineering of active brown adipose tissueR01DK118940 · NIDDK · UNIVERSITY OF CALIFORNIA BERKELEY · PI KUMAR, SANJAY, STAHL, ANDREAS · 2019 to 2022
$2.3M
Genome Sequencer FLXS10RR029668 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI NGAI, JOHN J. · 2010 to 2010
$623k
Illumina Sequencer to Facilitate Functional Genomics at BerkeleyS10RR027303 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI TAYLOR, JOHN W. · 2010 to 2010
$500k
High-throughput Analysis of MicroRNA Regulation of Stem Cell MechanobiologyR21EB025017 · NIBIB · UNIVERSITY OF CALIFORNIA BERKELEY · PI KUMAR, SANJAY · 2017 to 2018
$411k
Cadherin Regulation of Glioma Invasion: A Biophysical PerspectiveF32CA221366 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI CHEN, JOSEPH · 2017 to 2019
$147k
NCI NIH HHS F32 CA221366NCRR NIH HHS S10 RR027303NCRR NIH HHS S10 RR029668NIBIB NIH HHS R21 EB025017NIDDK NIH HHS R01 DK118940NIGMS NIH HHS R01 GM122375
6 · The paper itself

Abstract

The poor prognosis of glioblastoma (GBM) is associated with a highly invasive stem-like subpopulation of tumor-initiating cells (TICs), which drive recurrence and contribute to intra-tumoral heterogeneity through differentiation. These TICs are better able to escape extracellular matrix-imposed mechanical restrictions on invasion than their more differentiated progeny, and sensitization of TICs to extracellular matrix mechanics extends survival in preclinical models of GBM. However, little is known about the molecular basis of the relationship between TIC differentiation and mechanotransduction. Here we explore this relationship through a combination of transcriptomic analysis and studies with defined-stiffness matrices. We show that TIC differentiation induced by bone morphogenetic protein 4 (BMP4) suppresses expression of proteins relevant to extracellular matrix signaling and sensitizes TIC spreading to matrix stiffness. Moreover, our findings point towards a previously unappreciated connection between BMP4-induced differentiation, mechanotransduction, and metabolism. Notably, stiffness and differentiation modulate oxygen consumption, and inhibition of oxidative phosphorylation influences cell spreading in a stiffness- and differentiation-dependent manner. Our work integrates bioinformatic analysis with targeted molecular measurements and perturbations to yield new insight into how morphogen-induced differentiation influences how GBM TICs process mechanical inputs.

Indexed as

Bone Morphogenetic Protein 4Brain NeoplasmsCell DifferentiationCell Line, TumorExtracellular MatrixGene Expression ProfilingGene Expression Regulation, NeoplasticGlioblastomaHumansMechanotransduction, CellularNeoplastic Stem CellsOxidative PhosphorylationPrognosisSignal TransductionBMP4 protein, humanBone Morphogenetic Protein 4Bone morphogenetic proteinGlioblastomaMechanotransductionMetabolismOxidative phosphorylationStem cell

Identifiers

PMID31189077
PMCPMC6900459
OpenAlexW2948236542

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.