Evidence map›Paper›PMID 31187399›Full record

ArticleInternational journal of computer assisted radiology and surgery2019

Enabling machine learning in X-ray-based procedures via realistic simulation of image formation.

Mathias Unberath, Jan-Nico Zaech, Cong Gao, Bastian Bier, Florian Goldmann, Sing Chun Lee, Javad Fotouhi, Russell Taylor, Mehran Armand, Nassir Navab

Abstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. FluoroSAM: A Language-promptable Foundation Model for Flexible X-ray Image Segmentation.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2026
    Article
  3. Article
  4. Review
  5. Parametric-MAA: fast, object-centric avoidance of metal artifacts for intraoperative CBCT.International journal of computer assisted radiology and surgery · 2025
    Article
  6. Cannula-mounted Robots for Semi-autonomous Vertebroplasty: A Comparison of Piezo-based and Screw-based Inchworm Drive Designs.... International Symposium on Medical Robotics. International Symposium on Medical Robotics · 2025
    Article
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  12. Article
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  14. Article
  15. Mixed Reality Interfaces for Achieving Desired Views with Robotic X-ray Systems.Computer methods in biomechanics and biomedical engineering. Imaging & visualization · 2023
    Article
  16. Fluoroscopy-Guided Robotic System for Transforaminal Lumbar Epidural Injections.IEEE transactions on medical robotics and bionics · 2022
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mathias UnberathDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA. unberath@jhu.edu.ORCID http://orcid.org/0000-0002-0055-9950
Jan-Nico ZaechLaboratory for Computational Sensing + Robotics, Johns Hopkins University, Baltimore, MD, USA.
Cong GaoDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Bastian BierLaboratory for Computational Sensing + Robotics, Johns Hopkins University, Baltimore, MD, USA.
Florian GoldmannLaboratory for Computational Sensing + Robotics, Johns Hopkins University, Baltimore, MD, USA.
Sing Chun LeeDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Javad FotouhiDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Russell TaylorDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.
Mehran ArmandLaboratory for Computational Sensing + Robotics, Johns Hopkins University, Baltimore, MD, USA.
Nassir NavabDepartment of Computer Science, Johns Hopkins University, Baltimore, MD, USA.

Funding

Image-Guided Workstation and Tools for the Treatment of Bone DefectsR01EB016703 · NIBIB · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI ARMAND, MEHRAN · 2013 to 2022
$3.4M
Robot-Assisted Femoroplasty with Intraoperative Biomechanical FeedbackR01EB023939 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI ARMAND, MEHRAN · 2017 to 2020
$1.6M
X-Ray Image-based Biomechanical Guidance for Hip SurgeryR21EB020113 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI ARMAND, MEHRAN · 2015 to 2016
$397k
NIBIB NIH HHS R01 EB016703NIBIB NIH HHS R01 EB023939NIBIB NIH HHS R21 EB020113NIH HHS R01 EB0223939NIH HHS R21 EB020113Nvidia Hardware Seed Grant
6 · The paper itself

Abstract

purposeMachine learning-based approaches now outperform competing methods in most disciplines relevant to diagnostic radiology. Image-guided procedures, however, have not yet benefited substantially from the advent of deep learning, in particular because images for procedural guidance are not archived and thus unavailable for learning, and even if they were available, annotations would be a severe challenge due to the vast amounts of data. In silico simulation of X-ray images from 3D CT is an interesting alternative to using true clinical radiographs since labeling is comparably easy and potentially readily available.

methodsWe extend our framework for fast and realistic simulation of fluoroscopy from high-resolution CT, called DeepDRR, with tool modeling capabilities. The framework is publicly available, open source, and tightly integrated with the software platforms native to deep learning, i.e., Python, PyTorch, and PyCuda. DeepDRR relies on machine learning for material decomposition and scatter estimation in 3D and 2D, respectively, but uses analytic forward projection and noise injection to ensure acceptable computation times. On two X-ray image analysis tasks, namely (1) anatomical landmark detection and (2) segmentation and localization of robot end-effectors, we demonstrate that convolutional neural networks (ConvNets) trained on DeepDRRs generalize well to real data without re-training or domain adaptation. To this end, we use the exact same training protocol to train ConvNets on naïve and DeepDRRs and compare their performance on data of cadaveric specimens acquired using a clinical C-arm X-ray system.

resultsOur findings are consistent across both considered tasks. All ConvNets performed similarly well when evaluated on the respective synthetic testing set. However, when applied to real radiographs of cadaveric anatomy, ConvNets trained on DeepDRRs significantly outperformed ConvNets trained on naïve DRRs ([Formula: see text]).

conclusionOur findings for both tasks are positive and promising. Combined with complementary approaches, such as image style transfer, the proposed framework for fast and realistic simulation of fluoroscopy from CT contributes to promoting the implementation of machine learning in X-ray-guided procedures. This paradigm shift has the potential to revolutionize intra-operative image analysis to simplify surgical workflows.

Indexed as

FluoroscopyMachine LearningNeural Networks, ComputerTomography, X-Ray ComputedAlgorithmsCadaverComputer SimulationHumansImage Processing, Computer-AssistedImaging, Three-DimensionalModels, AnatomicScattering, RadiationX-RaysArtificial intelligenceComputer assisted surgeryImage guidanceMonte Carlo simulationRobotic surgerySegmentation

Identifiers

PMID31187399
PMCPMC7297499

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.