Evidence map›Paper›PMID 31185914›Full record

ArticleBMC genomics2019

Revegetation on abandoned salt ponds relieves the seasonal fluctuation of soil microbiomes.

Huyen-Trang Tran, Hao-Chu Wang, Tsai-Wen Hsu, Rakesh Sarkar, Chao-Li Huang, Tzen-Yuh Chiang

Abstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Huyen-Trang TranDepartment of Life Sciences, National Cheng Kung University, Tainan, Taiwan, 70101.
Hao-Chu WangDepartment of Life Sciences, National Cheng Kung University, Tainan, Taiwan, 70101.
Tsai-Wen HsuTaiwan Endemic Species Research Institute, Nantou, Taiwan, 55244.
Rakesh SarkarDepartment of Life Sciences, National Cheng Kung University, Tainan, Taiwan, 70101.
Chao-Li HuangInstitute of Tropical Plant Sciences, National Cheng Kung University, Tainan, Taiwan, 70101. clhuang65535@mail.ncku.edu.tw.ORCID http://orcid.org/0000-0002-1059-432X
Tzen-Yuh ChiangDepartment of Life Sciences, National Cheng Kung University, Tainan, Taiwan, 70101. tychiang@mail.ncku.edu.tw.

Funding

National Cheng Kung University Aim for the Top University Project
6 · The paper itself

Abstract

backgroundSalt pond restoration aims to recover the environmental damages that accumulated over the long history of salt production. Of the restoration strategies, phytoremediation that utilizes salt-tolerant plants and soil microorganisms to reduce the salt concentrations is believed to be environmentally-friendly. However, little is known about the change of bacterial community during salt pond restoration in the context of phytoremediation. In the present study, we used 16S metagenomics to compare seasonal changes of bacterial communities between the revegetated and barren salterns at Sicao, Taiwan.

resultsIn both saltern types, Proteobacteria, Planctomycetes, Chloroflexi, and Bacteroidetes were predominant at the phylum level. In the revegetated salterns, the soil microbiomes displayed high species diversities and underwent a stepwise transition across seasons. In the barren salterns, the soil microbiomes fluctuated greatly, indicating that mangroves tended to stabilize the soil microorganism communities over the succession. Bacteria in the order Halanaerobiaceae and archaea in the family Halobacteriaceae that were adapted to high salinity exclusively occurred in the barren salterns. Among the 441 persistent operational taxonomic units detected in the revegetated salterns, 387 (87.5%) were present as transient species in the barren salterns. Only 32 persistent bacteria were exclusively detected in the revegetated salterns. Possibly, salt-tolerant plants provided shelters for those new colonizers.

conclusionsThe collective data indicate that revegetation tended to stabilize the microbiome across seasons and enriched the microbial diversity in the salterns, especially species of Planctomycetes and Acidobacteria.

Indexed as

MicrobiotaPlant DevelopmentSaltsSeasonsSoil MicrobiologyEcosystemEnvironmental Restoration and RemediationMetabolic Networks and PathwaysPondsSaltsMangrove revegetationMetagenomicsPlant-microbe interactionSalt pond restorationSeasonal fluctuation

Identifiers

PMID31185914
PMCPMC6558789

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.