Evidence map›Paper›PMID 31185584›Full record

ArticleCells2019

Cardiac Rhythm and Molecular Docking Studies of Ion Channel Ligands with Cardiotoxicity in Zebrafish.

Bonifasius Putera Sampurna, Fiorency Santoso, Jia-Hau Lee, Wen-Hao Yu, Chin-Chung Wu, Gilbert Audira, Stevhen Juniardi, Jung-Ren Chen, Ying-Ting Lin, Chung-Der Hsiao

Open access · goldAbstract read
In one paragraph

Article in Cells, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Bonifasius Putera SampurnaDepartment of Bioscience Technology, Chung Yuan Christian University, Chung-Li 32023, Taiwan. boni_bt123@hotmail.com.
Fiorency SantosoDepartment of Bioscience Technology, Chung Yuan Christian University, Chung-Li 32023, Taiwan. fiorency_santoso@yahoo.co.id.
Jia-Hau LeeDepartment of Biotechnology, College of Life Science, Kaohsiung Medical University, Kaohsiung 80708, Taiwan. u105831002@kmu.edu.tw.
Wen-Hao YuDepartment of Biotechnology, College of Life Science, Kaohsiung Medical University, Kaohsiung 80708, Taiwan. u104022019@kmu.edu.tw.
Chin-Chung WuGraduate Institute of Natural Products, College of Pharmacy, Kaohsiung Medical University, Kaohsiung 80708, Taiwan. ccwu@kmu.edu.tw.
Gilbert AudiraDepartment of Bioscience Technology, Chung Yuan Christian University, Chung-Li 32023, Taiwan. gilbertaudira@yahoo.com.
Stevhen JuniardiDepartment of Bioscience Technology, Chung Yuan Christian University, Chung-Li 32023, Taiwan. stvn.jun@gmail.com.
Jung-Ren ChenDepartment of Biological Science & Technology College of Medicine, I-Shou University, Kaohsiung 82445, Taiwan. jrchen@isu.edu.tw.
Ying-Ting LinDepartment of Biotechnology, College of Life Science, Kaohsiung Medical University, Kaohsiung 80708, Taiwan. ytlin@kmu.edu.tw.ORCID 0000-0001-8096-3402
Chung-Der HsiaoDepartment of Bioscience Technology, Chung Yuan Christian University, Chung-Li 32023, Taiwan. cdhsiao@cycu.edu.tw.ORCID 0000-0002-6398-8672
Chung Yuan Christian University · TWKaohsiung Medical University · TWI-Shou University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Safety is one of the most important and critical issues in drug development. Many drugs were abandoned in clinical trials and retracted from the market because of unknown side effects. Cardiotoxicity is one of the most common reasons for drug retraction due to its potential side effects, i.e., inducing either tachycardia, bradycardia or arrhythmia. The zebrafish model could be used to screen drug libraries with potential cardiotoxicity in a high-throughput manner. In addition, the fundamental principles of replacement, reduction, and refinement of laboratory animal usage, 3R, could be achieved by using zebrafish as an alternative to animal models. In this study, we used a simple ImageJ-based method to evaluate and screen 70 ion channel ligands and successfully identify six compounds with strong cardiotoxicity in vivo. Next, we conducted an in silico-based molecular docking simulation to elucidate five identified compounds that might interact with domain III or domain IV of the

Indexed as

Heart RateLigandsAnimalsBinding SitesCalcium Channels, L-TypeEmbryo, NonmammalianHydrogen BondingIon ChannelsMolecular Docking SimulationProtein Structure, TertiarySmall Molecule LibrariesZebrafishZebrafish ProteinsCalcium Channels, L-TypeIon ChannelsLigandsL-type calcium channel alpha(1C)Small Molecule LibrariesZebrafish Proteinscardiotoxicityheartion channel ligandmolecular dockingzebrafish

Identifiers

PMID31185584
PMCPMC6627553
OpenAlexW2948944135

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.