Evidence map›Paper›PMID 31183520›Full record

ArticleJournal of mathematical biology2020

Bridging the gap between individual-based and continuum models of growing cell populations.

Mark A J Chaplain, Tommaso Lorenzi, Fiona R Macfarlane

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of mathematical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Comparative analysis of continuum angiogenesis models.Journal of mathematical biology · 2021
    Article
  11. Population dynamics with spatial structure and an Allee effect.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
  12. Predicting population extinction in lattice-based birth-death-movement models.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
  13. From a discrete model of chemotaxis with volume-filling to a generalized Patlak-Keller-Segel model.Proceedings. Mathematical, physical, and engineering sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mark A J ChaplainSchool of Mathematics and Statistics, University of St Andrews, St Andrews, KY16 9SS, Scotland.
Tommaso LorenziSchool of Mathematics and Statistics, University of St Andrews, St Andrews, KY16 9SS, Scotland.
Fiona R MacfarlaneSchool of Mathematics and Statistics, University of St Andrews, St Andrews, KY16 9SS, Scotland. frm3@st-andrews.ac.uk.ORCID http://orcid.org/0000-0003-2242-7745

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations that describe the evolution of cellular densities in response to pressure gradients generated by population growth. Little prior work has explored the relation between such continuum models and related single-cell-based models. We present here a simple stochastic individual-based model for the spatial dynamics of multicellular systems whereby cells undergo pressure-driven movement and pressure-dependent proliferation. We show that nonlinear partial differential equations commonly used to model the spatial dynamics of growing cell populations can be formally derived from the branching random walk that underlies our discrete model. Moreover, we carry out a systematic comparison between the individual-based model and its continuum counterparts, both in the case of one single cell population and in the case of multiple cell populations with different biophysical properties. The outcomes of our comparative study demonstrate that the results of computational simulations of the individual-based model faithfully mirror the qualitative and quantitative properties of the solutions to the corresponding nonlinear partial differential equations. Ultimately, these results illustrate how the simple rules governing the dynamics of single cells in our individual-based model can lead to the emergence of complex spatial patterns of population growth observed in continuum models.

Indexed as

Models, BiologicalCell CycleCell MovementCell ProliferationComputer SimulationSpatial AnalysisContinuum modelsGrowing cell populationsIndividual-based modelsPressure-driven cell movementPressure-limited growth

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.