Evidence map›Paper›PMID 31182004›Full record

ArticleBMC bioinformatics2019

Probe computing model based on small molecular switch.

Yanan Wang, Qi Lv, Yingying Zhang, Luhui Wang, Yafei Dong

Abstract read
In one paragraph

Article in BMC bioinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yanan WangSchool of Computer Science, Shaanxi Normal University, Xi'an, 710119, China.
Qi LvCollege of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China.
Yingying ZhangSchool of Computer Science, Shaanxi Normal University, Xi'an, 710119, China.
Luhui WangCollege of Life Sciences, Shaanxi Normal University, Xi'an, 710119, China.
Yafei DongSchool of Computer Science, Shaanxi Normal University, Xi'an, 710119, China. dongyf@snnu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDNA is a promising candidate for the construction of biological devices due to its unique properties, including structural simplicity, convenient synthesis, high flexibility, and predictable behavior. And DNA has been widely used to construct the advanced logic devices.

resultsHerein, a molecular probe apparatus was constructed based on DNA molecular computing to perform fluorescent quenching and fluorescent signal recovery, with an ' ON/OFF' switching function. In this study, firstly, we program the streptavidin-mediated fluorescent quenching apparatus based on short-distance strand migration. The variation of fluorescent signal is acted as output. Then DNAzyme as a switching controller was involved to regulate the fluorescent signal increase. Finally, on this base, a cascade DNA logic gate consists of two logic AND operations was developed to enrich probe machine.

conclusionThe designed probe computing model can be implemented with readout of fluorescence intensity, and exhibits great potential applications in the field of bioimaging as well as disease diagnosis.

Indexed as

Computer SimulationDNADNA, CatalyticFluorescenceLogicMolecular ProbesSignal Processing, Computer-AssistedStreptavidinDNADNA, CatalyticMolecular ProbesStreptavidinDNA molecular computingDNAzymeProbe machineStreptavidin

Identifiers

PMID31182004
PMCPMC6557740

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.