Evidence map›Paper›PMID 31181069›Full record

ArticlePloS one2019

Influence of genetic factors on long-term treatment related neurocognitive complications, and on anxiety and depression in survivors of childhood acute lymphoblastic leukemia: The Petale study.

Kateryna Petrykey, Sarah Lippé, Philippe Robaey, Serge Sultan, Julie Laniel, Simon Drouin, Laurence Bertout, Patrick Beaulieu, Pascal St-Onge, Aubrée Boulet-Craig and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Genetic Factors and Long-term Treatment-Related Neurocognitive Deficits, Anxiety, and Depression in Childhood Leukemia Survivors: An Exome-Wide Association Study.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2024
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Role of Autophagy and Apoptosis in Acute Lymphoblastic Leukemia.Cancer control : journal of the Moffitt Cancer Center
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Kateryna PetrykeySainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Sarah LippéSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Philippe RobaeySainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Serge SultanSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Julie LanielSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Simon DrouinSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Laurence BertoutSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Patrick BeaulieuSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Pascal St-OngeSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Aubrée Boulet-CraigSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Aziz RezguiSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Yutaka YasuiEpidemiology and Cancer Control Department, St. Jude Children's Research Hospital, Memphis, TN, United States of America.
Yadav SapkotaEpidemiology and Cancer Control Department, St. Jude Children's Research Hospital, Memphis, TN, United States of America.
Kevin R KrullEpidemiology and Cancer Control Department, St. Jude Children's Research Hospital, Memphis, TN, United States of America.
Melissa M HudsonEpidemiology and Cancer Control Department, St. Jude Children's Research Hospital, Memphis, TN, United States of America.
Caroline LaverdièreSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Daniel SinnettSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.ORCID 0000-0003-3625-6676
Maja KrajinovicSainte-Justine University Health Center (SJUHC), Montreal, Quebec, Canada.
Centre Hospitalier Universitaire Sainte-Justine · CASt. Jude Children's Research Hospital · USUniversity of Ottawa · CA

Funding

The St. Jude Lifetime CohortU01CA195547 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI HUDSON, MELISSA M, NESS, KIRSTEN KIMBERLIE · 2015 to 2024
$14.9M
NCI NIH HHS U01 CA195547
6 · The paper itself

Abstract

backgroundA substantial number of survivors of childhood acute lymphoblastic leukemia suffer from treatment-related late adverse effects including neurocognitive impairment. While multiple studies have described neurocognitive outcomes in childhood acute lymphoblastic leukemia (ALL) survivors, relatively few have investigated their association with individual genetic constitution.

methodsTo further address this issue, genetic variants located in 99 genes relevant to the effects of anticancer drugs and in 360 genes implicated in nervous system function and predicted to affect protein function, were pooled from whole exome sequencing data of childhood ALL survivors (PETALE cohort) and analyzed for an association with neurocognitive complications, as well as with anxiety and depression. Variants that sustained correction for multiple testing were genotyped in entire cohort (n = 236) and analyzed with same outcomes.

resultsCommon variants in MTR, PPARA, ABCC3, CALML5, CACNB2 and PCDHB10 genes were associated with deficits in neurocognitive tests performance, whereas a variant in SLCO1B1 and EPHA5 genes was associated with anxiety and depression. Majority of associations were modulated by intensity of treatment. Associated variants were further analyzed in an independent SJLIFE cohort of 545 ALL survivors. Two variants, rs1805087 in methionine synthase, MTR and rs58225473 in voltage-dependent calcium channel protein encoding gene, CACNB2 are of particular interest, since associations of borderline significance were found in replication cohort and remain significant in combined discovery and replication groups (OR = 1.5, 95% CI, 1-2.3; p = 0.04 and; OR = 3.7, 95% CI, 1.25-11; p = 0.01, respectively). Variant rs4149056 in SLCO1B1 gene also deserves further attention since previously shown to affect methotrexate clearance and short-term toxicity in ALL patients.

conclusionsCurrent findings can help understanding of the influence of genetic component on long-term neurocognitive impairment. Further studies are needed to confirm whether identified variants may be useful in identifying survivors at increased risk of these complications.

Indexed as

5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseAdolescentAdultAntimetabolites, AntineoplasticAnxietyCalcium Channels, L-TypeChildChild, PreschoolCohort StudiesDepressionFemaleHumansInfantLiver-Specific Organic Anion Transporter 1Long-Term CareMale5-Methyltetrahydrofolate-Homocysteine S-MethyltransferaseAntimetabolites, AntineoplasticCalcium Channels, L-TypeLiver-Specific Organic Anion Transporter 1Methotrexate

Identifiers

PMID31181069
PMCPMC6557490
OpenAlexW2949639665

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.