Evidence map›Paper›PMID 31180185›Full record

ArticleMicrobial biotechnology2019

An update of the suicide plasmid-mediated genome editing system in Corynebacterium glutamicum.

Ting Wang, Yanjun Li, Juan Li, Dezhi Zhang, Ningyun Cai, Guihong Zhao, Hongkun Ma, Can Shang, Qian Ma, Qingyang Xu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 65 citations in OpenAlex.

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  14. Synthetic biology tools for engineeringComputational and structural biotechnology journal · 2023
    Review
  15. Review
  16. Analysis of the Plasmid-BasedApplied and environmental microbiology · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Ting WangCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Yanjun LiCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.ORCID 0000-0001-6441-0314
Juan LiCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Dezhi ZhangCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Ningyun CaiCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Guihong ZhaoCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Hongkun MaCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Can ShangCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Qian MaCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Qingyang XuCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Ning ChenCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300457, China.
Tianjin University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corynebacterium glutamicum is an important industrial microorganism, but the availability of tools for its genetic modification has lagged compared to other model microorganisms such as Escherichia coli. Despite great progress in CRISPR-based technologies, the most feasible genome editing method in C. glutamicum is suicide plasmid-mediated, the editing efficiency of which is low due to high false-positive rates of sacB counter selection, and the requirement for tedious two-round selection and verification of rare double-cross-over events. In this study, an rpsL mutant conferring streptomycin resistance was harnessed for counter selection, significantly increasing the positive selection rate. More importantly, with the aid of high selection efficiencies through the use of antibiotics, namely kanamycin and streptomycin, the two-step verification strategy can be simplified to just one-step verification of the final edited strain. As proof of concept, a 2.5-kb DNA fragment comprising aroG

Indexed as

Selection, GeneticAnti-Bacterial AgentsCorynebacterium glutamicumDrug Resistance, BacterialEscherichia coli ProteinsGene EditingGenetics, MicrobialGenetic VectorsIndustrial MicrobiologyMutant ProteinsPlasmidsRibosomal ProteinsRibosomal Protein S9StreptomycinAnti-Bacterial AgentsEscherichia coli ProteinsMutant ProteinsRibosomal ProteinsRibosomal Protein S9RpsI protein, E coliStreptomycin

Identifiers

PMID31180185
PMCPMC6680612
OpenAlexW2949403150

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.