Evidence map›Paper›PMID 31179453›Full record

ArticlePhysical chemistry chemical physics : PCCP2019

PET and FRET utility of an amino acid pair: tryptophan and 4-cyanotryptophan.

Ismail A Ahmed, Jeffrey M Rodgers, Christina Eng, Thomas Troxler, Feng Gai

Open access · greenAbstract read
In one paragraph

Article in Physical chemistry chemical physics : PCCP, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ismail A AhmedDepartment of Biochemistry and Biophysics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Jeffrey M Rodgers
Christina Eng
Thomas Troxler
Feng Gai
California University of Pennsylvania · US

Funding

ULTRAFAST OPTICAL PROCESSES LABORATORYP41GM104605 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GAI, FENG · 2012 to 2017
$5.6M
Interrogating Early Tau Aggregation Using Unnatural Amino Acid Spectroscopic ProbesF99NS108544 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI AHMED, ISMAIL A. · 2018 to 2018
$30k
NIGMS NIH HHS P41 GM104605NINDS NIH HHS F99 NS108544
6 · The paper itself

Abstract

Methods based on fluorescence resonance energy transfer (FRET) and photo-induced electron transfer (PET) are widely used in the biological sciences, employing mostly dye-based FRET and PET pairs. While very useful and important, dye-based reporters are not always applicable without concern, for example, in cases where the fluorophore size needs to be minimized. Therefore, development and characterization of smaller, ideally amino acid-based PET and FRET pairs will expand the biological spectroscopy toolbox to enable new applications. Herein, we show that, depending on the excitation wavelength, tryptophan and 4-cyanotrptophan can interact with each other via the mechanism of either energy or electron transfer, hence constituting a dual FRET and PET pair. The biological utility of this amino acid pair is further demonstrated by applying it to study the end-to-end collision rate of a short peptide, the mode of interaction between a ligand and BSA, and the activity of a protease.

Indexed as

Electron TransportFluorescence Resonance Energy TransferFluorescent DyesLigandsOligopeptidesProtein BindingSerum Albumin, BovineSpectrometry, FluorescenceTrypsinTryptophanFluorescent DyesLigandsOligopeptidesSerum Albumin, BovineTrypsinTryptophan

Identifiers

PMID31179453
PMCPMC6587589
OpenAlexW2948468188

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.