Evidence map›Paper›PMID 31179213›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2019

A Cell-free DNA Barcode-Enabled Single-Molecule Test for Noninvasive Prenatal Diagnosis of Monogenic Disorders: Application to β-Thalassemia.

Xingkun Yang, Qinghua Zhou, Wanjun Zhou, Mei Zhong, Xiaoling Guo, Xiaofeng Wang, Xin Fan, Shanhuo Yan, Liyan Li, Yunli Lai and 10 more

Abstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Non-invasive prenatal diagnosis (NIPD): current and emerging technologies.Extracellular vesicles and circulating nucleic acids · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Xingkun YangDepartment of Medical Genetics School of Basic Medical Sciences Southern Medical University Guangzhou Guangdong 510515 China.
Qinghua ZhouThe Center for Precision Medicine of First Affiliated Hospital Biomedical Translational Research Institute School of Pharmacy Jinan University Guangzhou Guangdong 510632 China.
Wanjun ZhouDepartment of Medical Genetics School of Basic Medical Sciences Southern Medical University Guangzhou Guangdong 510515 China.
Mei ZhongNanfang Hospital Southern Medical University Guangzhou Guangdong 510515 China.
Xiaoling GuoAffiliated Foshan Maternity & Child Healthcare Hospital Southern Medical University Foshan Guangdong 528000 China.
Xiaofeng WangHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Xin FanGuangxi Zhuang Autonomous Region Women and Children Care Hospital Nanning Guangxi 530000 China.
Shanhuo YanQinzhou Maternity & Child Healthcare Hospital Qinzhou Guangxi 535000 China.
Liyan LiNanfang Hospital Southern Medical University Guangzhou Guangdong 510515 China.
Yunli LaiGuangxi Zhuang Autonomous Region Women and Children Care Hospital Nanning Guangxi 530000 China.
Yongli WangHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Jin HuangDepartment of Medical Genetics School of Basic Medical Sciences Southern Medical University Guangzhou Guangdong 510515 China.
Yuhua YeDepartment of Medical Genetics School of Basic Medical Sciences Southern Medical University Guangzhou Guangdong 510515 China.
Huaping ZengHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Jun ChuanHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Yuanping DuHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Chouxian MaHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Peining LiDepartment of Genetics Yale University New Haven CT 06520 USA.
Zhuo SongHunan Research Center for Big Data Application in Genomics Genetalks Inc. Changsha Hunan 410152 China.
Xiangmin XuDepartment of Medical Genetics School of Basic Medical Sciences Southern Medical University Guangzhou Guangdong 510515 China.ORCID https://orcid.org/0000-0003-2775-8228

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Noninvasive prenatal testing of common aneuploidies has become routine over the past decade, but testing of monogenic disorders remains a challenge in clinical implementation. Most recent studies have inherent limitations, such as complicated procedures, a lack of versatility, and the need for prior knowledge of parental genotypes or haplotypes. To overcome these limitations, a robust and versatile next-generation sequencing-based cell-free DNA (cfDNA) allelic molecule counting system termed cfDNA barcode-enabled single-molecule test (cfBEST) is developed for the noninvasive prenatal diagnosis (NIPD) of monogenic disorders. The accuracy of cfBEST is found to be comparable to that of droplet digital polymerase chain reaction (ddPCR) in detecting low-abundance mutations in cfDNA. The analytical validity of cfBEST is evidenced by a β-thalassemia assay, in which a blind validation study of 143 at-risk pregnancies reveals a sensitivity of 99.19% and a specificity of 99.92% on allele detection. Because the validated cfBEST method can be used to detect maternal-fetal genotype combinations in cfDNA precisely and quantitatively, it holds the potential for the NIPD of human monogenic disorders.

Indexed as

cell‐free DNA barcode‐enabled single‐molecule test (cfBEST)molecule counting systemmonogenic disordersnoninvasive prenatal diagnosis (NIPD)β‐thalassemia

Identifiers

PMID31179213
PMCPMC6548944

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.