Evidence map›Paper›PMID 31177541›Full record

ArticleJournal of inherited metabolic disease2019

AMP-activated protein kinase signaling regulated expression of urea cycle enzymes in response to changes in dietary protein intake.

Sandra K Heibel, Peter J McGuire, Nantaporn Haskins, Himani D Majumdar, Sree Rayavarapu, Kanneboyina Nagaraju, Yetrib Hathout, Kristy Brown, Mendel Tuchman, Ljubica Caldovic

Open access · greenAbstract read
In one paragraph

Article in Journal of inherited metabolic disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. CPS1: Looking at an ancient enzyme in a modern light.Molecular genetics and metabolism · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Sandra K HeibelCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Peter J McGuireMedical Genomics and Metabolic Genetics Branch, National Human Genome Research Institute, Bethesda, Maryland.
Nantaporn HaskinsCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Himani D MajumdarCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Sree RayavarapuCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Kanneboyina NagarajuDepartment of Pharmaceutical Sciences, Binghamton University, Binghamton, New York.
Yetrib HathoutDepartment of Pharmaceutical Sciences, Binghamton University, Binghamton, New York.
Kristy BrownCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Mendel TuchmanCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.
Ljubica CaldovicCenter for Genetic Medicine Research, Children's National Medical Center, Washington, District of Columbia.ORCID 0000-0002-9140-5585
Children's National · USBinghamton University · USNational Human Genome Research Institute · US

Funding

Metabolism, infection and immunity in inborn errors of mitochondrial metabolismZIAHG200381 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI MCGUIRE, PETER · 2012 to 2025
$21.7M
N-acetylglutamate Synthase: Structure, Function & DefectsR01DK064913 · NIDDK · CHILDREN'S RESEARCH INSTITUTE · PI CALDOVIC, LJUBICA MORIZONO · 2003 to 2017
$4.9M
Molecular Regulation of UreagenesisK01DK076846 · NIDDK · CHILDREN'S RESEARCH INSTITUTE · PI CALDOVIC, LJUBICA MORIZONO · 2008 to 2010
$323k
NIDDK NIH HHS K01 DK076846NIDDK NIH HHS R01 DK064913
6 · The paper itself

Abstract

Abundance of urea cycle enzymes in the liver is regulated by dietary protein intake. Although urea cycle enzyme levels rise in response to a high-protein (HP) diet, signaling networks that sense dietary protein intake and trigger changes in expression of urea cycle genes have not been identified. The aim of this study was to identify signaling pathway(s) that respond to changes in protein intake and regulate expression of urea cycle genes in mice and human hepatocytes. Mice were adapted to either HP or low-protein diets followed by isolation of liver protein and mRNA and integrated analysis of the proteomic and transcriptomic data. HP diet led to increased expression of mRNA and enzymes in amino acid degradation pathways and decreased expression of mRNA and enzymes in carbohydrate and fat metabolism, which implicated adenosine monophosphate-activated protein kinase (AMPK) as a possible regulator. Primary human hepatocytes, treated with 5-aminoimidazole-4-carboxamide ribonucleotide (AICAR) an activator of AMPK, were used to test whether AMPK regulates expression of urea cycle genes. The abundance of carbamoylphosphate synthetase 1 and ornithine transcarbamylase mRNA increased in hepatocytes treated with AICAR, which supports a role for AMPK signaling in regulation of the urea cycle. Because AMPK is either a target of drugs used to treat type-2 diabetes, these drugs might increase the expression of urea cycle enzymes in patients with partial urea cycle disorders, which could be the basis of a new therapeutic approach.

Indexed as

Aminoimidazole CarboxamideAMP-Activated Protein KinasesAnimalsCells, CulturedDietary ProteinsEnzymesGene Expression Regulation, EnzymologicHepatocytesHumansMaleMiceMice, Inbred C57BLRibonucleotidesSignal TransductionUreaAICA ribonucleotideAminoimidazole CarboxamideAMP-Activated Protein KinasesDietary ProteinsEnzymesRibonucleotidesUreaamino acidsAMPK signalingdietary protein intakegene expressionphosphorylationproteomeregulationsignalingSILAMtranscriptomeurea cycle

Identifiers

PMID31177541
PMCPMC7385982
OpenAlexW2951328796

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.