Evidence map›Paper›PMID 31176687›Full record

ArticleExperimental neurology2019

A missense mutation in SLC6A1 associated with Lennox-Gastaut syndrome impairs GABA transporter 1 protein trafficking and function.

Kefu Cai, Jie Wang, Jaclyn Eissman, Juexin Wang, Gerald Nwosu, Wangzhen Shen, Hui-Ci Liang, Xiao-Jing Li, Hai-Xia Zhu, Yong-Hong Yi and 6 more

Abstract readCase Reports
In one paragraph

Article in Experimental neurology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 53 citations in OpenAlex.

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  16. A transporter's doom or destiny:Frontiers in molecular neuroscience · 2024
    Review
  17. Gene therapy for neurotransmitter-related disorders.Journal of inherited metabolic disease · 2024
    Review
  18. γ-Aminobutyric acid transporter and GABABrain communications · 2024
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Kefu CaiDepartment of Neurology, Vanderbilt University Medical Center, TN 37232, USA; Department of Neurology, Affiliated Hospital, Nantong University, Nantong, Jiangsu 226001, China.
Jie WangInstitute of Neuroscience and Department of Neurology of the Second Affiliated Hospital of Guangzhou Medical University, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, Guangzhou 510260, China.
Jaclyn EissmanDepartment of Neurology, Vanderbilt University Medical Center, TN 37232, USA.
Juexin WangDepartment of Electrical Engineering & Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.
Gerald NwosuNeuroscience Graduate Program, Vanderbilt-Meharry Alliance, Vanderbilt University, TN 37235, USA.
Wangzhen ShenDepartment of Neurology, Vanderbilt University Medical Center, TN 37232, USA.
Hui-Ci LiangGuangzhou Women and Children's Medical Center Guangzhou Children's Hospital, Guangzhou, China.
Xiao-Jing LiGuangzhou Women and Children's Medical Center Guangzhou Children's Hospital, Guangzhou, China.
Hai-Xia ZhuGuangzhou Women and Children's Medical Center Guangzhou Children's Hospital, Guangzhou, China.
Yong-Hong YiInstitute of Neuroscience and Department of Neurology of the Second Affiliated Hospital of Guangzhou Medical University, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, Guangzhou 510260, China.
Jeffrey SongDepartment of Neurology, Vanderbilt University Medical Center, TN 37232, USA.
Dong XuDepartment of Electrical Engineering & Computer Science and Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.
Eric DelpireDepartment of Anesthesiology, Vanderbilt University Department of Anesthesiology, Vanderbilt University, Nashville, TN 37232, USA.
Wei-Ping LiaoInstitute of Neuroscience and Department of Neurology of the Second Affiliated Hospital of Guangzhou Medical University, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, Guangzhou 510260, China.
Yi-Wu ShiInstitute of Neuroscience and Department of Neurology of the Second Affiliated Hospital of Guangzhou Medical University, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, Guangzhou 510260, China. Electronic address: stoneyiwu@163.com.
Jing-Qiong KangDepartment of Neurology, Vanderbilt University Medical Center, TN 37232, USA. Electronic address: Jingqiong.kang@vanderbilt.edu.
Second Affiliated Hospital of Guangzhou Medical University · CNVanderbilt University Medical Center · USGuangzhou Women and Children Medical Center · CNVanderbilt University · USNantong University · CNUniversity of Missouri · US

Funding

Research Project: Sensory and Multisensory Contributions to AutismU54HD083211 · NICHD · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DYKENS, ELISABETH MAY · 2015 to 2019
$7.1M
Multi-view self-supervised deep learning for biological sequences and beyondR35GM126985 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI DONG XU · 2018 to 2026
$3.8M
Altered synapse formation and function in a novel Dravet syndrome mouse modelR01NS082635 · NINDS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KANG, JING-QIONG · 2013 to 2017
$1.7M
NICHD NIH HHS U54 HD083211NIGMS NIH HHS R35 GM126985NINDS NIH HHS R01 NS082635
6 · The paper itself

Abstract

backgroundMutations in SLC6A1 have been associated mainly with myoclonic atonic epilepsy (MAE) and intellectual disability. We identified a novel missense mutation in a patient with Lennox-Gastaut syndrome (LGS) characterized by severe seizures and developmental delay.

methodsExome Sequencing was performed in an epilepsy patient cohort. The impact of the mutation was evaluated by

resultsWe discovered a heterozygous missense mutation (c700G to A [pG234S) in the SLC6A1 encoding GABA transporter 1 (GAT-1). Structural modeling suggests the mutation destabilizes the global protein conformation. With transient expression of enhanced yellow fluorescence protein (YFP) tagged rat GAT-1 cDNAs, we demonstrated that the mutant GAT-1(G234S) transporter had reduced total protein expression in both rat cortical neurons and HEK 293 T cells. With a high-throughput flow cytometry assay and live cell surface biotinylation, we demonstrated that the mutant GAT-1(G234S) had reduced cell surface expression.

conclusionsThis mutation caused instability of the mutant transporter protein, which resulted in reduced cell surface and total protein levels. The mutation also caused reduced GABA uptake in addition to reduced protein expression, leading to reduced GABA clearance, and altered GABAergic signaling in the brain. The impaired trafficking and reduced GABA uptake function may explain the epilepsy phenotype in the patient.

Indexed as

AdolescentAnimalsGABA Plasma Membrane Transport ProteinsHEK293 CellsHeLa CellsHumansLennox Gastaut SyndromeMaleMutation, MissensePedigreeProtein TransportRatsGABA Plasma Membrane Transport ProteinsSLC6A1 protein, human(3)H GABA uptakeEpilepsyGABA transporter 1Lennox-Gastaut syndromeMutationTrafficking

Identifiers

PMID31176687
PMCPMC6849469
OpenAlexW2950989497

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.