Evidence map›Paper›PMID 31176038›Full record

ArticleBiochimica et biophysica acta. Molecular and cell biology of lipids2019

Multiple neurosteroid and cholesterol binding sites in voltage-dependent anion channel-1 determined by photo-affinity labeling.

Wayland W L Cheng, Melissa M Budelier, Yusuke Sugasawa, Lucie Bergdoll, María Queralt-Martín, William Rosencrans, Tatiana K Rostovtseva, Zi-Wei Chen, Jeff Abramson, Kathiresan Krishnan and 3 more

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular and cell biology of lipids, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. New directions in neurosteroid therapeutics in neuropsychiatry.Neuroscience and biobehavioral reviews · 2025
    Review
  5. Article
  6. Review
  7. Neurosteroid enantiomers as potentially novel neurotherapeutics.Neuroscience and biobehavioral reviews · 2023
    Review
  8. Review
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. A C-Terminally Truncated Variant ofFrontiers in physiology · 2021
    Article
  18. Review
  19. MicroED structure of lipid-embedded mammalian mitochondrial voltage-dependent anion channel.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Wayland W L ChengDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA.
Melissa M BudelierDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA; Department of Biochemistry and Molecular Biophysics, Washington University in St. Louis, MO 63110, USA.
Yusuke SugasawaDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA.
Lucie BergdollDepartment of Physiology, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.
María Queralt-MartínSection on Molecular Transport, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
William RosencransSection on Molecular Transport, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Tatiana K RostovtsevaSection on Molecular Transport, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892, USA.
Zi-Wei ChenDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA; Taylor Family Institute for Innovative Psychiatric Research, Washington University in St. Louis, MO 63110, USA.
Jeff AbramsonDepartment of Physiology, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.
Kathiresan KrishnanDepartment of Developmental Biology, Washington University in St. Louis, MO 63110, USA.
Douglas F CoveyDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA; Department of Developmental Biology, Washington University in St. Louis, MO 63110, USA; Department of Psychiatry, Washington University in St. Louis, MO 63110, USA; Taylor Family Institute for Innovative Psychiatric Research, Washington University in St. Louis, MO 63110, USA.
Julian P WhiteleggeDepartment of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.
Alex S EversDepartment of Anesthesiology, Washington University in St. Louis, MO 63110, USA; Department of Developmental Biology, Washington University in St. Louis, MO 63110, USA; Department of Psychiatry, Washington University in St. Louis, MO 63110, USA; Taylor Family Institute for Innovative Psychiatric Research, Washington University in St. Louis, MO 63110, USA. Electronic address: eversa@wustl.edu.
Washington University in St. Louis · USNational Institutes of Health · USUniversity of California, Los Angeles · USEunice Kennedy Shriver National Institute of Child Health and Human Development · USNeurobehavioral Systems · US

Funding

STRUCTURE/ACTIVITY STUDIES OF NEUROSTEROID ANALOGUESP01GM047969 · NIGMS · WASHINGTON UNIVERSITY · PI STEINBACH, JOSEPH H. · 1992 to 2011
$18.7M
Structures of sodium glucose transporters by cryo electron microscopyR01GM078844 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABRAMSON, JEFFREY S · 2006 to 2018
$5.3M
TRAINING PROGRAM IN ANESTHESIOLOGY RESEARCHT32GM108539 · NIGMS · WASHINGTON UNIVERSITY · PI Aaron J Norris · 2014 to 2026
$4.9M
MOLECULAR SITES OF NEUROSTEROID BINDINGR01GM108799 · NIGMS · WASHINGTON UNIVERSITY · PI EVERS, ALEX S. · 2014 to 2022
$4.0M
Characterizing Neurosteroid Binding in the GABA(A) Receptor Using Top-Down Mass SpectrometryK08GM126336 · NIGMS · WASHINGTON UNIVERSITY · PI CHENG, WAYLAND WING-LUN · 2017 to 2019
$544k
NIGMS NIH HHS K08 GM126336NIGMS NIH HHS P01 GM047969NIGMS NIH HHS R01 GM078844NIGMS NIH HHS R01 GM108799NIGMS NIH HHS T32 GM108539
6 · The paper itself

Abstract

Voltage-dependent anion channel-1 (VDAC1) is a mitochondrial porin that is implicated in cellular metabolism and apoptosis, and modulated by numerous small molecules including lipids. VDAC1 binds sterols, including cholesterol and neurosteroids such as allopregnanolone. Biochemical and computational studies suggest that VDAC1 binds multiple cholesterol molecules, but photolabeling studies have identified only a single cholesterol and neurosteroid binding site at E73. To identify all the binding sites of neurosteroids in VDAC1, we apply photo-affinity labeling using two sterol-based photolabeling reagents with complementary photochemistry: 5α-6-AziP which contains an aliphatic diazirine, and KK200 which contains a trifluoromethyl-phenyldiazirine (TPD) group. 5α-6-AziP and KK200 photolabel multiple residues within an E73 pocket confirming the presence of this site and mapping sterol orientation within this pocket. In addition, KK200 photolabels four other sites consistent with the finding that VDAC1 co-purifies with five cholesterol molecules. Both allopregnanolone and cholesterol competitively prevent photolabeling at E73 and three other sites indicating that these are common sterol binding sites shared by both neurosteroids and cholesterol. Binding at the functionally important residue E73 suggests a possible role for sterols in regulating VDAC1 signaling and interaction with partner proteins.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCholesterolMiceModels, MolecularNeurosteroidsProtein BindingVoltage-Dependent Anion Channel 1CholesterolNeurosteroidsVdac1 protein, mouseVoltage-Dependent Anion Channel 1CholesterolMass spectrometryNeurosteroidPhotoaffinity labelingProtein drug interactionVoltage-dependent anion channel (VDAC)

Identifiers

PMID31176038
PMCPMC6681461
OpenAlexW2948469272

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.