Evidence map›Paper›PMID 31175045›Full record

ArticleCell host & microbe2019

IFI16 Targets the Transcription Factor Sp1 to Suppress HIV-1 Transcription and Latency Reactivation.

Dominik Hotter, Matteo Bosso, Kasper L Jønsson, Christian Krapp, Christina M Stürzel, Atze Das, Elisabeth Littwitz-Salomon, Ben Berkhout, Alina Russ, Sabine Wittmann and 9 more

Open access · goldAbstract read
In one paragraph

Article in Cell host & microbe, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 136 citations in OpenAlex.

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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 4 countries.

Dominik HotterInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany.
Matteo BossoInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany.
Kasper L JønssonDepartment of Biomedicine, Aarhus University, 8000 Aarhus, Denmark.
Christian KrappInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany; Department of Biomedicine, Aarhus University, 8000 Aarhus, Denmark.
Christina M StürzelInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany.
Atze DasLaboratory of Experimental Virology, Department of Medical Microbiology, University of Amsterdam, 1105 Amsterdam, the Netherlands.
Elisabeth Littwitz-SalomonInstitute for Virology, University Hospital Essen, University of Duisburg-Essen, 45147 Essen, Germany.
Ben BerkhoutLaboratory of Experimental Virology, Department of Medical Microbiology, University of Amsterdam, 1105 Amsterdam, the Netherlands.
Alina RussInstitute of Clinical and Molecular Virology, Friedrich-Alexander University Erlangen-Nürnberg, 91054 Erlangen, Germany.
Sabine WittmannInstitute of Clinical and Molecular Virology, Friedrich-Alexander University Erlangen-Nürnberg, 91054 Erlangen, Germany.
Thomas GrambergInstitute of Clinical and Molecular Virology, Friedrich-Alexander University Erlangen-Nürnberg, 91054 Erlangen, Germany.
Yue ZhengDivision of Microbiology and Immunology, Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Laura J MartinsDivision of Microbiology and Immunology, Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Vicente PlanellesDivision of Microbiology and Immunology, Department of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Martin R JakobsenDepartment of Biomedicine, Aarhus University, 8000 Aarhus, Denmark.
Beatrice H HahnDepartments of Medicine and Microbiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Ulf DittmerInstitute for Virology, University Hospital Essen, University of Duisburg-Essen, 45147 Essen, Germany.
Daniel SauterInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany.
Frank KirchhoffInstitute of Molecular Virology, Ulm University Medical Center, 89081 Ulm, Germany. Electronic address: frank.kirchhoff@uni-ulm.de.
Universität Ulm · DEAarhus University · DKFriedrich-Alexander-Universität Erlangen-Nürnberg · DEUniversity of Utah · USUniversity of Amsterdam · NLUniversity of Duisburg-Essen · DEUniversity of Pennsylvania · US

Funding

First-in-human study of two anti-SARS CoV-2 antibodies in health volunteersUM1AI126620 · NIAID · WISTAR INSTITUTE · PI MONTANER, LUIS J, RILEY, JAMES L. · 2016 to 2021
$24.5M
Restriction of HIV-1 transmission by type 1 interferonsR01AI114266 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2014 to 2018
$3.2M
Preclinical Development of Ingenol and HDACi Toward HIV EradicationR33AI122377 · NIAID · UNIVERSITY OF UTAH · PI PLANELLES, VICENTE · 2018 to 2020
$1.1M
NIAID NIH HHS R01 AI114266NIAID NIH HHS R33 AI122377NIAID NIH HHS UM1 AI126620
6 · The paper itself

Abstract

The interferon γ-inducible protein 16 (IFI16) is known as immune sensor of retroviral DNA intermediates. We show that IFI16 restricts HIV-1 independently of immune sensing by binding and inhibiting the host transcription factor Sp1 that drives viral gene expression. This antiretroviral activity and ability to bind Sp1 require the N-terminal pyrin domain and nuclear localization of IFI16, but not the HIN domains involved in DNA binding. Highly prevalent clade C HIV-1 strains are more resistant to IFI16 and less dependent on Sp1 than other HIV-1 subtypes. Furthermore, inhibition of Sp1 by IFI16 or pharmacologically by Mithramycin A suppresses reactivation of latent HIV-1 in CD4

Indexed as

Transcription, GeneticVirus ActivationVirus LatencyAnimalsCD4-Positive T-LymphocytesCells, CulturedGenotypeHIV-1Immunologic FactorsMiceNuclear ProteinsPhosphoproteinsSp1 Transcription FactorIfi16 protein, mouseImmunologic FactorsNuclear ProteinsPhosphoproteinsSP1 protein, humanSp1 Transcription FactorHIV-1interferon γ-inducible PYHIN protein 16PYHIN proteinsrestriction factorsSp1 transcription factor

Identifiers

PMID31175045
PMCPMC6681451
OpenAlexW2948981772

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.