Evidence map›Paper›PMID 31172382›Full record

ArticleJournal of cheminformatics2019

An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding.

Angela Serra, Serli Önlü, Pietro Coretto, Dario Greco

Abstract read
In one paragraph

Article in Journal of cheminformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  7. Nextcast: A software suite to analyse and model toxicogenomics data.Computational and structural biotechnology journal · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Angela SerraFaculty of Medicine and Health Technology, Tampere University, Arvo Ylpön katu 34, Tampere, Finland.
Serli ÖnlüFaculty of Medicine and Health Technology, Tampere University, Arvo Ylpön katu 34, Tampere, Finland.
Pietro CorettoDISES, STATLAB, University of Salerno, Giovanni Paolo II 132, Fisciano, Italy.
Dario GrecoFaculty of Medicine and Health Technology, Tampere University, Arvo Ylpön katu 34, Tampere, Finland. dario.greco@tuni.fi.ORCID http://orcid.org/0000-0001-9195-9003

Funding

Terveyden Tutkimuksen Toimikunta 275151Terveyden Tutkimuksen Toimikunta 292307
6 · The paper itself

Abstract

backgroundTraditional quantitative structure-activity relationship models usually neglect the molecular alterations happening in the exposed systems (the mechanism of action, MOA), that mediate between structural properties of compounds and phenotypic effects of an exposure.

resultsHere, we propose a computational strategy that integrates molecular descriptors and MOA information to better explain the mechanisms underlying biological endpoints of interest. By applying our methodology, we obtained a statistically robust and validated model to predict the binding affinity to human serum albumin. Our model is also able to provide new venues for the interpretation of the chemical-biological interactions.

conclusionOur observations suggest that integrated quantitative models of structural and MOA-activity relationships are promising complementary tools in the arsenal of strategies aiming at developing new safe- and useful-by-design compounds.

Indexed as

Human serum albumin bindingIntegrative analysisLassoMOAMolecular descriptorsQSARQSMARtRegressionSafe-by-design

Identifiers

PMID31172382
PMCPMC6551915

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.