Evidence map›Paper›PMID 31171826›Full record

ArticleScientific reports2019

QTL-seq identifies cooked grain elongation QTLs near soluble starch synthase and starch branching enzymes in rice (Oryza sativa L.).

Siwaret Arikit, Samart Wanchana, Srisawat Khanthong, Chatree Saensuk, Tripop Thianthavon, Apichart Vanavichit, Theerayut Toojinda

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. QTL-Seq and pyramiding of yield-related loci from wild rice (Molecular breeding : new strategies in plant improvement · 2026
    Article
  2. Article
  3. Article
  4. FScientific reports · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Fine mapping of a new common bean anthracnose resistance gene (Co-18) to the proximal end of Pv10 in Indian landrace KRC-5.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Efficient identification of palatability-related genes using QTL mapping in rice breeding.Molecular breeding : new strategies in plant improvement · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Identification of a major QTL,Frontiers in plant science · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Siwaret ArikitDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Samart WanchanaNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Luang, Pathum Thani, 12120, Thailand.
Srisawat KhanthongFaculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Chatree SaensukRice Science Center, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Tripop ThianthavonFaculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Apichart VanavichitDepartment of Agronomy, Faculty of Agriculture at Kamphaeng Saen, Kasetsart University Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.
Theerayut ToojindaNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Luang, Pathum Thani, 12120, Thailand. theerayut@biotec.or.th.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grain quality is one of the main targets that rice breeders focus on to improve elite rice varieties. Several characteristics are considered when determine rice grain quality, such as aroma, amylose content (AC), gelatinization temperature (GT) and, especially, lengthwise grain elongation (GE). GE is a desirable feature in premium rice of high quality, such as India and Pakistan' Basmati. Inheritance of GE in rice has not been clearly elucidated due to its complex and inconsistent pattern. In this study, we identified QTLs for GE in rice using bulk-segregant analysis (BSA) and whole-genome sequencing based on an F

Indexed as

Quantitative Trait Loci1,4-alpha-Glucan Branching EnzymeAmyloseChromosome MappingChromosomes, PlantCrosses, GeneticEdible GrainGenes, PlantGenetic MarkersGenotypeIndiaOryzaPakistanPhenotypePlant ProteinsPolymorphism, Single Nucleotide1,4-alpha-Glucan Branching EnzymeAmyloseGenetic MarkersPlant ProteinsStarch Synthasestarch synthase II

Identifiers

PMID31171826
PMCPMC6554297

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.