Evidence map›Paper›PMID 31171782›Full record

ArticleNature communications2019

Vibrio sp. dhg as a platform for the biorefinery of brown macroalgae.

Hyun Gyu Lim, Dong Hun Kwak, Sungwoo Park, Sunghwa Woo, Jae-Seong Yang, Chae Won Kang, Beomhee Kim, Myung Hyun Noh, Sang Woo Seo, Gyoo Yeol Jung

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
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  5. Review
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  15. 4-Deoxy-l-Molecules (Basel, Switzerland) · 2022
    Review
  16. Article
  17. Article
  18. Review
  19. EngineeringComputational and structural biotechnology journal · 2021
    Article
  20. Biological upgrading of 3,6-anhydro-L-galactose from agarose to a new platform chemical.Green chemistry : an international journal and green chemistry resource : GC · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hyun Gyu LimDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.ORCID http://orcid.org/0000-0002-0469-2388
Dong Hun KwakSchool of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.
Sungwoo ParkSchool of Chemical and Biological Engineering, Institute of Chemical Process, Seoul National University, 1 Gwanak-Ro, Gwanak-Gu, Seoul, 08826, Korea.ORCID http://orcid.org/0000-0001-6228-0288
Sunghwa WooDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.ORCID http://orcid.org/0000-0002-1500-8107
Jae-Seong YangDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.
Chae Won KangDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.
Beomhee KimSchool of Chemical and Biological Engineering, Institute of Chemical Process, Seoul National University, 1 Gwanak-Ro, Gwanak-Gu, Seoul, 08826, Korea.ORCID http://orcid.org/0000-0003-1656-4516
Myung Hyun NohDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea.
Sang Woo SeoSchool of Chemical and Biological Engineering, Institute of Chemical Process, Seoul National University, 1 Gwanak-Ro, Gwanak-Gu, Seoul, 08826, Korea. swseo@snu.ac.kr.ORCID http://orcid.org/0000-0002-7434-7053
Gyoo Yeol JungDepartment of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk, 37673, Korea. gyjung@postech.ac.kr.ORCID http://orcid.org/0000-0002-9742-3207

Funding

National Research Foundation of Korea (NRF) NRF-2016K1A1A2912829National Research Foundation of Korea (NRF) NRF-2018M3A9H3020459National Research Foundation of Korea (NRF) NRF-2018M3D3A1A01055754National Research Foundation of Korea (NRF) NRF-2018R1A6A3A11045727
6 · The paper itself

Abstract

Although brown macroalgae holds potential as an alternative feedstock, its utilization by conventional microbial platforms has been limited due to the inability to metabolize one of the principal sugars, alginate. Here, we isolate Vibrio sp. dhg, a fast-growing bacterium that can efficiently assimilate alginate. Based on systematic characterization of the genomic information of Vibrio sp. dhg, we establish a genetic toolbox for its engineering. We also demonstrate its ability to rapidly produce ethanol, 2,3-butanediol, and lycopene from brown macroalgae sugar mixture with high productivities and yields. Collectively, Vibrio sp. dhg can be used as a platform for the efficient conversion of brown macroalgae sugars into diverse value-added biochemicals.

Indexed as

AlginatesButylene GlycolsEthanolLycopeneMannitolPhaeophyceaeSeaweedVibrio2,3-butylene glycolAlginatesButylene GlycolsEthanolLycopeneMannitol

Identifiers

PMID31171782
PMCPMC6554313

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.