Evidence map›Paper›PMID 31171699›Full record

ArticleGenes & development2019

GADD45 promotes locus-specific DNA demethylation and 2C cycling in embryonic stem cells.

Katrin M Schüle, Manuel Leichsenring, Tommaso Andreani, Viviana Vastolo, Medhavi Mallick, Michael U Musheev, Emil Karaulanov, Christof Niehrs

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. DUX: One Transcription Factor Controls 2-Cell-like Fate.International journal of molecular sciences · 2022
    Review
  12. The regulation of totipotency transcription: Perspective fromFrontiers in cell and developmental biology · 2022
    Review
  13. Roles for GADD45 in Development and Cancer.Advances in experimental medicine and biology · 2022
    Review
  14. Gadd45 Proteins in Immunity 2.0.Advances in experimental medicine and biology · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Katrin M Schüle *Institute of Molecular Biology (IMB), 55128 Mainz, Germany.
Manuel Leichsenring *Institute of Molecular Biology (IMB), 55128 Mainz, Germany.
Tommaso AndreaniInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Viviana VastoloInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Medhavi MallickInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Michael U MusheevInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Emil KaraulanovInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Christof NiehrsInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Institute of Molecular Biology · DEGerman Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mouse embryonic stem cell (ESC) cultures contain a rare cell population of "2C-like" cells resembling two-cell embryos, the key stage of zygotic genome activation (ZGA). Little is known about positive regulators of the 2C-like state and two-cell stage embryos. Here we show that GADD45 (growth arrest and DNA damage 45) proteins, regulators of TET (TET methylcytosine dioxygenase)-mediated DNA demethylation, promote both states. Methylome analysis of

Indexed as

DNA DemethylationGene Expression Regulation, DevelopmentalAnimalsAntigens, DifferentiationCell Cycle ProteinsCells, CulturedEmbryonic Stem CellsGADD45 ProteinsGene Knockout TechniquesMiceNuclear ProteinsAntigens, DifferentiationCell Cycle ProteinsGadd45a protein, mouseGadd45b protein, mouseGADD45 ProteinsNuclear Proteins5-hydroxymethylcytosinedemethylationGADD45TETtwo-cell embryoZGAZSCAN4

Identifiers

PMID31171699
PMCPMC6601511
OpenAlexW2954210135

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.