Evidence map›Paper›PMID 31170499›Full record

ArticleBiochimica et biophysica acta. General subjects2019

Unexpected implications of STAT3 acetylation revealed by genetic encoding of acetyl-lysine.

Yael Belo, Zachery Mielko, Hila Nudelman, Ariel Afek, Oshrit Ben-David, Anat Shahar, Raz Zarivach, Raluca Gordan, Eyal Arbely

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. General subjects, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Interferon-JAK-STAT Axis in Bone Metabolism.Current osteoporosis reports · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Therapeutic Potential ofInternational journal of molecular sciences · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The structural influence of the oncogenic driver mutation N642H in the STAT5B SH2 domain.Protein science : a publication of the Protein Society · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. UV irradiation remodels the specificity landscape of transcription factors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Yael BeloDepartment of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel.
Zachery MielkoCenter for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics, Duke University, Durham, NC 27708, USA.
Hila NudelmanDepartment of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel.
Ariel AfekCenter for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics, Duke University, Durham, NC 27708, USA.
Oshrit Ben-DavidDepartment of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel; The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel.
Anat ShaharThe National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel.
Raz ZarivachThe National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel; Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel.
Raluca GordanCenter for Genomic and Computational Biology, Department of Biostatistics and Bioinformatics, Duke University, Durham, NC 27708, USA; Department of Computer Science, Department of Molecular Genetics and Microbiology, Duke University, Durham, NC 27708, USA.
Eyal ArbelyDepartment of Chemistry, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel; The National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva 8410501, Israel; Department of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, 8410501, Israel. Electronic address: arbely@bgu.ac.il.
Ben-Gurion University of the Negev · ILDuke University · US

Funding

Computational Biology and Bioinformatics Training ProgramT32GM071340 · NIGMS · DUKE UNIVERSITY · PI MAGWENE, PAUL MITAARI · 2005 to 2020
$3.3M
New methods for quantitative modeling of protein-DNA interactionsR01GM117106 · NIGMS · DUKE UNIVERSITY · PI GORDAN, RALUCA · 2015 to 2019
$1.8M
NIGMS NIH HHS R01 GM117106NIGMS NIH HHS T32 GM071340
6 · The paper itself

Abstract

The signal transducer and activator of transcription 3 (STAT3) protein is activated by phosphorylation of a specific tyrosine residue (Tyr705) in response to various extracellular signals. STAT3 activity was also found to be regulated by acetylation of Lys685. However, the molecular mechanism by which Lys685 acetylation affects the transcriptional activity of STAT3 remains elusive. By genetically encoding the co-translational incorporation of acetyl-lysine into position Lys685 and co-expression of STAT3 with the Elk receptor tyrosine kinase, we were able to characterize site-specifically acetylated, and simultaneously acetylated and phosphorylated STAT3. We measured the effect of acetylation on the crystal structure, and DNA binding affinity and specificity of Tyr705-phosphorylated and non-phosphorylated STAT3. In addition, we monitored the deacetylation of acetylated Lys685 by reconstituting the mammalian enzymatic deacetylation reaction in live bacteria. Surprisingly, we found that acetylation, per se, had no effect on the crystal structure, and DNA binding affinity or specificity of STAT3, implying that the previously observed acetylation-dependent transcriptional activity of STAT3 involves an additional cellular component. In addition, we discovered that Tyr705-phosphorylation protects Lys685 from deacetylation in bacteria, providing a new possible explanation for the observed correlation between STAT3 activity and Lys685 acetylation.

Indexed as

AcetylationBetaineHumansPhosphorylationProtein Processing, Post-TranslationalSignal TransductionSTAT3 Transcription FactorBetaineSTAT3 protein, humanSTAT3 Transcription FactorDeacetylationGenetic code expansionLysine acetylationPost-translational modifications crosstalkProtein-DNA interaction

Identifiers

PMID31170499
PMCPMC6625855
OpenAlexW2950615539

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.