Evidence map›Paper›PMID 31169073›Full record

ArticleEmerging microbes & infections2019

Comparative genomics and genome biology of

Tiffany Hsu, Matthew R Gemmell, Eric A Franzosa, Susan Berry, Indrani Mukhopadhya, Richard Hansen, Monia Michaud, Hans Nielsen, William G Miller, Henrik Nielsen and 4 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Emerging microbes & infections, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Microorganisms · 2024
    Review
  3. Species Delineation and Comparative Genomics within theJournal of clinical microbiology · 2023
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 5 countries.

Tiffany Hsua Department of Biostatistics , Harvard T. H. Chan School of Public Health , Boston , USA.
Matthew R Gemmellb School of Medicine, Medical Sciences and Nutrition , Centre for Genome Enabled Biology and Medicine, University of Aberdeen , Aberdeen , UK.
Eric A Franzosaa Department of Biostatistics , Harvard T. H. Chan School of Public Health , Boston , USA.
Susan Berryc School of Medicine, Medical Sciences and Nutrition , GI Research Group, University of Aberdeen , Aberdeen , UK.
Indrani Mukhopadhyac School of Medicine, Medical Sciences and Nutrition , GI Research Group, University of Aberdeen , Aberdeen , UK.
Richard Hansend Department of Paediatric Gastroenterology , Royal Hospital for Children , Glasgow , UK.
Monia Michaude Departments of Genetics and Complex Diseases and Immunology and Infectious Diseases , Harvard T. H. Chan School of Public Health , Boston , USA.
Hans Nielsenf Department of Clinical Microbiology , Aalborg University Hospital , Aalborg , Denmark.
William G Millerg Produce Safety and Microbiology Research Unit, U.S. Department of Agriculture , Agricultural Research Service , Albany , USA.
Henrik Nielsenh Department of Infectious Diseases , Aalborg University Hospital Aalborg , Denmark.
Mona Bajaj-Elliotti Infection, Immunity, Inflammation Programme , UCL Great Ormond Street Institute of Child Health , London , UK.
Curtis Huttenhowera Department of Biostatistics , Harvard T. H. Chan School of Public Health , Boston , USA.
Wendy S Garrette Departments of Genetics and Complex Diseases and Immunology and Infectious Diseases , Harvard T. H. Chan School of Public Health , Boston , USA.
Georgina L Holda Department of Biostatistics , Harvard T. H. Chan School of Public Health , Boston , USA.ORCID http://orcid.org/0000-0001-7573-3397
Harvard University · USUniversity of Aberdeen · GBAalborg University Hospital · DKAgricultural Research Service · USGreat Ormond Street Hospital · GBRoyal Children's Hospital · AU

Funding

A comprehensive platform for novel therapy development from the microbiomeR24DK110499 · NIDDK · BROAD INSTITUTE, INC. · PI HUTTENHOWER, CURTIS · 2017 to 2021
$7.7M
NIDDK NIH HHS R24 DK110499
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Genome, BacterialBacterial ProteinsCampylobacterCampylobacter InfectionsCrohn DiseaseGastroenteritisGenomicsHumansPhenotypePhylogenyVirulenceVirulence FactorsBacterial ProteinsVirulence Factorsbacterial secretion systemsbacterial virulence factorscomparative genomicsgastrointestinal diseasegenome biology

Identifiers

PMID31169073
PMCPMC6567213
OpenAlexW2948640047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.