Evidence map›Paper›PMID 31168651›Full record

ArticleApplied microbiology and biotechnology2019

Effect of ethanol supplementation on the transcriptional landscape of bionanocellulose producer Komagataeibacter xylinus E25.

Małgorzata Ryngajłło, Paulina Jacek, Izabela Cielecka, Halina Kalinowska, Stanisław Bielecki

Open access · hybridAbstract read
In one paragraph

Article in Applied microbiology and biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
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  14. Characterization of the Putative Acylated Cellulose Synthase Operon inInternational journal of molecular sciences · 2022
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  15. The Roles of the Various Cellulose Biosynthesis Operons inApplied and environmental microbiology · 2022
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  16. Comparative Analysis of Bacterial Cellulose Membranes Synthesized by ChosenInternational journal of molecular sciences · 2022
    Article
  17. Article
  18. Transcriptome Analysis ofPolish journal of microbiology · 2021
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Małgorzata RyngajłłoInstitute of Technical Biochemistry, Lodz University of Technology, B. Stefanowskiego 4/10, 90-924, Lodz, Poland. malgorzata.ryngajllo@p.lodz.pl.ORCID http://orcid.org/0000-0002-0430-0102
Paulina JacekInstitute of Technical Biochemistry, Lodz University of Technology, B. Stefanowskiego 4/10, 90-924, Lodz, Poland.
Izabela CieleckaInstitute of Technical Biochemistry, Lodz University of Technology, B. Stefanowskiego 4/10, 90-924, Lodz, Poland.
Halina KalinowskaInstitute of Technical Biochemistry, Lodz University of Technology, B. Stefanowskiego 4/10, 90-924, Lodz, Poland.
Stanisław BieleckiInstitute of Technical Biochemistry, Lodz University of Technology, B. Stefanowskiego 4/10, 90-924, Lodz, Poland.
Lodz University of Technology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ethanol exerts a strong positive effect on the cellulose yields from the widely exploited microbial producers of the Komagataeibacter genus. Ethanol is postulated to provide an alternative energy source, enabling effective use of glucose for cellulose biosynthesis rather than for energy acquisition. In this paper, we investigate the effect of ethanol supplementation on the global gene expression profile of Komagataeibacter xylinus E25 using RNA sequencing technology (RNA-seq). We demonstrate that when ethanol is present in the culture medium, glucose metabolism is directed towards cellulose production due to the induction of genes related to UDP-glucose formation and the repression of genes involved in glycolysis and acetan biosynthesis. Transcriptional changes in the pathways of cellulose biosynthesis and c-di-GMP metabolism are also described. The transcript level profiles suggest that Schramm-Hestrin medium supplemented with ethanol promotes bacterial growth by inducing protein biosynthesis and iron uptake. We observed downregulation of genes encoding transposases of the IS110 family which may provide one line of evidence explaining the positive effect of ethanol supplementation on the genotypic stability of K. xylinus E25. The results of this study increase knowledge and understanding of the regulatory effects imposed by ethanol on cellulose biosynthesis, providing new opportunities for directed strain improvement, scaled-up bionanocellulose production, and wider industrial exploitation of the Komagataeibacter species as bacterial cellulose producers.

Indexed as

AcetobacteraceaeCelluloseCulture MediaEthanolGene Expression ProfilingGene Expression Regulation, BacterialGlucoseMetabolic Networks and PathwaysCelluloseCulture MediaEthanolGlucoseBacterial celluloseBionanocelluloseEthanolKomagataeibacterRNA-seqTranscriptomics

Identifiers

PMID31168651
PMCPMC6667682
OpenAlexW2948219974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.