Evidence map›Paper›PMID 31168648›Full record

ArticleCurrent microbiology2019

Characterization and Complete Genome Analysis of the Carbazomycin B-Producing Strain Streptomyces luteoverticillatus SZJ61.

Zhibin Feng, Guozhong Chen, Jianlong Zhang, Hongwei Zhu, Xin Yu, Yifan Yin, Xingxiao Zhang

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Article in Current microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhibin FengSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Guozhong ChenSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Jianlong ZhangSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Hongwei ZhuSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Xin YuSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Yifan YinSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China.
Xingxiao ZhangSchool of Life Sciences, Ludong University, Yantai, 264025, Shandong, China. zhangxingxiao@ldu.edu.cn.

Funding

TARGETING OF AGENTS TO NORMAL AND MALIGNANT HEPATOCYTESK04CA001110 · NCI · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI WU, GEORGE Y · 1987 to 1991
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Ministry of Science and Technology of the People's Republic of China 2017YFD0501800Shandong Provincial Department of science and technology (CN) 2017GGH5129Shandong Provincial Department of Science and Technology (CN) SDAIT-11-10Yantai science and technology bureau (CN) 2017NC049
6 · The paper itself

Abstract

Members of marine Actinobacteria have been highly regarded as potentially important sources of antimicrobial compounds. Here, we isolated a strain of Actinobacteria, SZJ61, and showed that it inhibits the in vitro growth of fungi pathogenic to plants. This new isolate was identified as Streptomyces luteoverticillatus by morphological, biochemical and genetic analyses. Antifungal compounds were isolated from S. luteoverticillatus strain SZJ61 and characterized as carbazomycin B by nuclear magnetic resonance spectra. We then sequenced the genome of the S. luteoverticillatus SZJ61 strain, which consists of only one 7,367,863 bp linear chromosome that has a G+C content of 72.05%. Thirty-five putative biosynthetic gene clusters for secondary metabolites, including a variety of bioactive products, were found. Mining of the genome sequence information revealed the putative biosynthetic gene cluster of carbazomycin B. This genomic information is valuable for interpreting the biosynthetic mechanisms of diverse bioactive compounds that have potential applications in the pharmaceutical industry.

Indexed as

Genome, BacterialAntifungal AgentsBacterial ProteinsBase CompositionCarbazolesChinaGeologic SedimentsMultigene FamilyPhylogenyStreptomycesAntifungal AgentsBacterial ProteinsCarbazolescarbazomycin B

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.