Evidence map›Paper›PMID 31166480›Full record

ArticleMemorias do Instituto Oswaldo Cruz2019

Evolutionary study of potentially zoonotic hepatitis E virus genotype 3 from swine in Northeast Brazil.

Edmilson Ferreira de Oliveira-Filho, Debora Rl Dos Santos, Ricardo Durães-Carvalho, Adalúcia da Silva, Gustavo Barbosa de Lima, Antônio Fernando B Batista Filho, Lindomar J Pena, Laura Hvg Gil

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Trial
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  3. Review
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  6. Article
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  8. Article
  9. Review
  10. Seroprevalence of hepatitis E virus infection among volunteer blood donors in Central Brazil.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Edmilson Ferreira de Oliveira-FilhoFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Virologia, Recife, PE, Brasil.ORCID http://orcid.org/0000-0002-3771-1565
Debora Rl Dos SantosUniversidade Federal Rural do Rio de Janeiro, Instituto de Veterinária, Seropédica, RJ, Brasil.
Ricardo Durães-CarvalhoFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Virologia, Recife, PE, Brasil.
Adalúcia da SilvaFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Virologia, Recife, PE, Brasil.
Gustavo Barbosa de LimaFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Microbiologia, Recife, PE, Brasil.
Antônio Fernando B Batista FilhoUniversidade Federal Rural de Pernambuco, Departamento de Medicina Veterinária, Recife, PE, Brasil.
Lindomar J PenaFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Virologia, Recife, PE, Brasil.
Laura Hvg GilFundação Oswaldo Cruz-Fiocruz, Instituto Aggeu Magalhães, Departamento de Virologia, Recife, PE, Brasil.
Fundação Oswaldo Cruz · BRHumboldt-Universität zu Berlin · DEUniversidade Federal Rural de Pernambuco · BRUniversidade Federal Rural do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis E virus (HEV), an emerging virus associated with acute hepatic disease, leads to thousands of deaths worldwide. HEV has already been reported in Brazil; however, there is a lack of epidemiological and molecular information on the genetic variability, taxonomy, and evolution of HEV. It is thus unclear whether hepatitis E is a neglected disease in Brazil or it has low relevance for public health in this country. Here, for the first time, we report the presence of HEV in Northeast Brazil. A total of 119 swine faecal samples were screened for the presence of HEV RNA using real-time polymerase chain reaction (RT-PCR) and further confirmed by conventional RT-PCR; among these, two samples were identified as positive. Molecular evolution analyses based on capsid sequences revealed that the samples had close proximities to HEV sequences belonging to genotype 3 and were genetically related to subtype 3f isolated in humans. Parsimony ancestral states analysis indicated gene flow events from HEV cross-species infection, suggesting an important role of pig hosts in viral spillover. HEV's ability for zoonotic transmission by inter-species host switching as well as its possible adaptation to new animal species remain important issues for human health.

Indexed as

AnimalsBrazilCapsidFecesGenotypeHepatitis EHepatitis E virusHumansPhylogenyReal-Time Polymerase Chain ReactionRNA, ViralSequence Analysis, DNASwineSwine DiseasesZoonosesRNA, Viral

Identifiers

PMID31166480
PMCPMC6547807
OpenAlexW2947381649

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.