Evidence map›Paper›PMID 31165405›Full record

ArticleBulletin of mathematical biology2019

Dependence of CD8 T Cell Response upon Antigen Load During Primary Infection : Analysis of Data from Yellow Fever Vaccination.

James R Moore, Hasan Ahmed, Don McGuire, Rama Akondy, Rafi Ahmed, Rustom Antia

Open access · greenAbstract read
In one paragraph

Article in Bulletin of mathematical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

James R MooreDivision of Vaccines and Infectious Diseases, Fred Hutchinson Cancer Research Center, Seattle, USA. jrmoore@fhcrc.org.ORCID 0000-0001-5055-7075
Hasan AhmedDepartment of Biology, Emory University, Atlanta, USA.
Don McGuireEmory Vaccine Center, Emory University, Atlanta, USA.
Rama AkondyDepartment of Microbiology and Immunobiology, Emory University, Atlanta, USA.
Rafi AhmedEmory Vaccine Center, Emory University, Atlanta, USA.
Rustom AntiaDepartment of Biology, Emory University, Atlanta, USA.
Emory University · USFred Hutch Cancer Center · US

Funding

VACCINE INDUCED IMMUNITY IN THE YOUNG AND AGEDU19AI057266 · NIAID · EMORY UNIVERSITY · PI Rafi Ahmed · 2003 to 2026
$81.7M
Systems Biological Analysis of Innate and Adaptive Responses to VaccinationU19AI090023 · NIAID · EMORY UNIVERSITY · PI AHMED, RAFI, LI, SHUZHAO · 2010 to 2021
$45.0M
Understanding Transmission with Integrated Genetic and Epidemiologic InferenceU54GM111274 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BEDFORD, TREVOR BC · 2014 to 2018
$12.5M
Modeling the dynamics and evolution of immune responses to influenza virusesU19AI117891 · NIAID · EMORY UNIVERSITY · PI ANTIA, RUSTOM NOSHIR · 2015 to 2019
$8.4M
QUANTIFYING THE BALANCE BETWEEN VACCINE-INDUCED T CELL PROTECTION AND PATHOLOGYR01AI110720 · NIAID · EMORY UNIVERSITY · PI ANTIA, RUSTOM NOSHIR · 2014 to 2018
$2.0M
Quantititive models of CD8+ immune memoryR01AI049334 · NIAID · EMORY UNIVERSITY · PI ANTIA, RUSTOM NOSHIR · 2001 to 2011
$1.6M
NIAID NIH HHS R01 AI049334NIAID NIH HHS R01 AI110720NIAID NIH HHS U19 AI057266NIAID NIH HHS U19 AI090023NIAID NIH HHS U19 AI117891NIGMS NIH HHS U54 GM111274
6 · The paper itself

Abstract

A major question in immunology is what role antigen load plays in determining the size of the CD8 immune response. Is the amount of antigen important during recruitment, proliferation, and/or memory formation? Animal studies have shown that antigen is only strictly required early during activation of T cells, but the importance of antigen at later timepoints is unclear. Using data from 24 volunteers infected with the yellow fever vaccine virus (YFV), we analyzed the dependence of T cell proliferation upon viral load. We found that volunteers with high viral load initially have greater T cell responses, but by 28 days post-vaccination those with lower viral load are able to 'catch-up.' Using differential equation modeling we show that this pattern is consistent with viral load only affecting recruitment (i.e., programmed proliferation) as opposed to affecting recruitment and proliferation (i.e., antigen-dependent proliferation). A quantitative understanding of the dependence of T cell dynamics on antigen load will be of use to modelers studying not only vaccination, but also cancer immunology and autoimmune disorders.

Indexed as

Models, ImmunologicalAnimalsAntigens, ViralCD8-Positive T-LymphocytesCell ProliferationHumansImmunologic MemoryLinear ModelsLymphocyte ActivationMathematical ConceptsTime FactorsVaccinationViral LoadYellow FeverYellow Fever VaccineYellow fever virusAntigens, ViralYellow Fever VaccineProgrammed proliferationT cell proliferationYellow fever vaccine

Identifiers

PMID31165405
PMCPMC6657775
OpenAlexW2948215426

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.