Evidence map›Paper›PMID 31165280›Full record

ArticleJournal of industrial microbiology & biotechnology2019

Improved production of clavulanic acid by reverse engineering and overexpression of the regulatory genes in an industrial Streptomyces clavuligerus strain.

Hang Soo Cho, Jin Chul Jo, Chang-Hun Shin, Namil Lee, Joon-Sun Choi, Byung-Kwan Cho, Jung-Hye Roe, Chan-Wha Kim, Ho Jeong Kwon, Yeo Joon Yoon

Open access · bronzeAbstract read
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In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Genomic Diversity ofInternational journal of molecular sciences · 2024
    Article
  5. Article
  6. Re-classification ofiScience · 2021
    Article
  7. Article
  8. Clavulanic Acid Production byAntibiotics (Basel, Switzerland) · 2021
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Hang Soo ChoDepartment of Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea.
Jin Chul JoInstitute of Nano-Bio Technology, Ewha Womans University, Seoul, 03760, Republic of Korea.
Chang-Hun ShinDepartment of Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Namil LeeDepartment of Biological Sciences and KI for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon, 34141, Republic of Korea.
Joon-Sun ChoiSchool of Biological Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Byung-Kwan ChoDepartment of Biological Sciences and KI for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon, 34141, Republic of Korea.
Jung-Hye RoeSchool of Biological Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
Chan-Wha KimDepartment of Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Ho Jeong KwonDepartment of Biotechnology, Yonsei University, Seoul, 03722, Republic of Korea. kwonhj@yonsei.ac.kr.
Yeo Joon YoonDepartment of Chemistry and Nanoscience, Ewha Womans University, Seoul, 03760, Republic of Korea. joonyoon@ewha.ac.kr.ORCID http://orcid.org/0000-0002-3637-3103
Ewha Womans University · KRKorea Advanced Institute of Science and Technology · KRKorea University · KRSeoul National University · KRYonsei University · KR

Funding

Ministry of Science and ICT 20110031961National Research Foundation of Korea 2015K1A1A2028365National Research Foundation of Korea 2018M3A9F3079662National Research Foundation of Korea 2018M3A9F3079664National Research Foundation of Korea 2019R1A2B5B03069338
6 · The paper itself

Abstract

Genomic analysis of the clavulanic acid (CA)-high-producing Streptomyces clavuligerus strains, OL13 and OR, developed through random mutagenesis revealed a frameshift mutation in the cas1 gene-encoding clavaminate synthase 1. Overexpression of the intact cas1 in S. clavuligerus OR enhanced the CA titer by approximately 25%, producing ~ 4.95 g/L of CA, over the OR strain in the flask culture. Moreover, overexpression of the pathway-specific positive regulatory genes, ccaR and claR, in the OR strain improved CA yield by approximately 43% (~ 5.66 g/L) in the flask. However, co-expression of the intact cas1 with ccaR-claR did not further improve CA production. In the 7 L fermenter culture, maximum CA production by the OR strain expressing the wild-type cas1 and ccaR-claR reached approximately 5.52 g/L and 6.01 g/L, respectively, demonstrating that reverse engineering or simple rational metabolic engineering is an efficient method for further improvement of industrial strains.

Indexed as

Gene Expression Regulation, BacterialBioengineeringClavulanic AcidGenes, RegulatorMixed Function OxygenasesStreptomycesclavaminate synthaseClavulanic AcidMixed Function OxygenasesClavulanic acidMetabolic engineeringReverse engineeringStreptomyces clavuligerus

Identifiers

PMID31165280
OpenAlexW2948848032

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.