Evidence map›Paper›PMID 31164957›Full record

ArticleOncotarget2019

Detection of fusion transcripts in the serum samples of patients with hepatocellular carcinoma.

Yan-Ping Yu, Allan Tsung, Silvia Liu, Michael Nalesnick, David Geller, George Michalopoulos, Jian-Hua Luo

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yan-Ping YuDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Allan TsungDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Silvia LiuDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Michael NalesnickDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
David GellerDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
George MichalopoulosDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Jian-Hua LuoDepartment of Pathology and Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
University of Pittsburgh · USThe Ohio State University · US

Funding

Pittsburgh Liver Research CenterP30DK120531 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVID A GELLER · 2019 to 2026
$10.9M
The Role of Myopodin in Invasive Prostate CancersR01CA098249 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LUO, JIANHUA · 2003 to 2014
$2.6M
Genome targeting of liver cancerR56CA229262 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LUO, JIANHUA · 2018 to 2019
$705k
NCI NIH HHS R01 CA098249NCI NIH HHS R56 CA229262NIDDK NIH HHS P30 DK120531
6 · The paper itself

Abstract

Hepatocellular carcinoma is one of the most lethal cancers in the United States. Early detection of the disease is crucial for reducing the mortality of this malignancy. Recently, we identified a panel of fusion genes present in several types of human cancers, including hepatocellular carcinoma. Among 8 fusion genes, MAN2A1-FER, TRMT11-GRIK2 and CCNH-C5orf30 appear most frequently in hepatocellular carcinoma samples. In this study, we showed that the fusion transcripts of MAN2A1-FER, CCNH-C5orf30 and SLC45A2-AMACR were detected in the serum samples of liver cancer patients as circulating cell-free RNA. The distributions of these gene fusion RNA fragments largely matched those of the primary HCC samples. In contrast, the sera of all healthy individuals free of human malignancies were shown to be negative for these fusion genes. These results suggest that gene fusion RNA is frequently shed from liver cancer cells. The detection of serum cell-free fusion transcripts may provide a new approach to aid in the diagnosis, follow-up or therapy of liver cancers.

Indexed as

cell-free RNAfusion transcriptHCCserum detection

Identifiers

PMID31164957
PMCPMC6534357
OpenAlexW2983033790

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.