Evidence map›Paper›PMID 31164901›Full record

ArticleFrontiers in genetics2019

Multi-Omic Analysis of the Microbiome and Metabolome in Healthy Subjects Reveals Microbiome-Dependent Relationships Between Diet and Metabolites.

Zheng-Zheng Tang, Guanhua Chen, Qilin Hong, Shi Huang, Holly M Smith, Rachana D Shah, Matthew Scholz, Jane F Ferguson

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04308473 (Analysis of MicroBial Metabolites After Eating Refined Food), which is not on this map. Cited by 86 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 3 pooled it
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04308473 nacompletednot on this mapstarted 2020, after this paper: background citation

Analysis of MicroBial Metabolites After Eating Refined Food

TypeinterventionalSponsorThe Cleveland ClinicRan2020 to 2026Enrolled46ConditionsDietary HabitsArmsUltra-processed Food Meal, Whole Food Meal
3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 3 syntheses or guidelines pooled it, 166 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Trial
  6. Trial
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Pathological Alterations in Human Blood Microbiome-An Updated Review.International journal of molecular sciences · 2025
    Review
  16. Article
  17. Impacts of non-nutritive sweeteners on the human microbiome.Immunometabolism (Cobham, Surrey) · 2025
    Review
  18. Review
  19. Evaluation of solutions for stabilizing feces in metabolomics studies using GC × GC-TOFMS.Metabolomics : Official journal of the Metabolomic Society · 2025
    Article
  20. Medicinal Cannabis and the Intestinal Microbiome.Pharmaceuticals (Basel, Switzerland) · 2024
    Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Zheng-Zheng TangDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.
Guanhua ChenDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.
Qilin HongDepartment of Statistics, University of Wisconsin-Madison, Madison, WI, United States.
Shi HuangDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, United States.
Holly M SmithDivision of Cardiovascular Medicine, Vanderbilt University Medical Center, Nashville, TN, United States.
Rachana D ShahDivision of Pediatric Endocrinology, Children's Hospital of Philadelphia, Philadelphia, PA, United States.
Matthew ScholzVanderbilt Technologies for Advanced Genomics (VANTAGE), Vanderbilt University Medical Center, Nashville, TN, United States.
Jane F FergusonDivision of Cardiovascular Medicine, Vanderbilt University Medical Center, Nashville, TN, United States.
Vanderbilt University Medical Center · USUniversity of Wisconsin–Madison · USChildren's Hospital of Philadelphia · US

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Glycomics of Heart and Lung Disease in the Genomic EraU01HL108636 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI REILLY, MUREDACH P · 2011 to 2014
$2.4M
American Heart Association-American Stroke Association 15SDG24890015NHLBI NIH HHS U01 HL108636NIDDK NIH HHS P30 DK058404
6 · The paper itself

Abstract

The human microbiome has been associated with health status, and risk of disease development. While the etiology of microbiome-mediated disease remains to be fully elucidated, one mechanism may be through microbial metabolism. Metabolites produced by commensal organisms, including in response to host diet, may affect host metabolic processes, with potentially protective or pathogenic consequences. We conducted multi-omic phenotyping of healthy subjects (

Indexed as

dietinteractionmediationmetabolomemicrobiomemulti-omics analysis

Identifiers

PMID31164901
PMCPMC6534069
OpenAlexW2945425561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.