Evidence map›Paper›PMID 31164616›Full record

ArticleMethods and protocols2019

Electroextraction of Insoluble Proteins from the Organic Matrix of the Nacreous Layer of the Japanese Pearl Oyster,

Daisuke Funabara, Natsumi Miyashita, Kiyohito Nagai, Kaoru Maeyama, Satoshi Kanoh

Open access · goldAbstract read
In one paragraph

Article in Methods and protocols, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Daisuke FunabaraGraduate School of Bioresources, Mie University, Kurimamachiya 1577, Tsu, 514-8507, Japan. funabara@bio.mie-u.ac.jp.
Natsumi MiyashitaGraduate School of Bioresources, Mie University, Kurimamachiya 1577, Tsu, 514-8507, Japan. natsumimiyashita262@gmail.com.
Kiyohito NagaiPearl Research Laboratory, K. MIKIMOTO & CO., LTD., Osaki Hazako 923, Hamajima, Shima, 517-0403, Japan. k-nagai@mikimoto.com.
Kaoru MaeyamaMikimoto Pharmaceutical CO., LTD., Kurose 1425, Ise, 516-8581, Japan. maeyama.511@mikimoto-cosme.com.
Satoshi KanohGraduate School of Bioresources, Mie University, Kurimamachiya 1577, Tsu, 514-8507, Japan. kanoh@bio.mie-u.ac.jp.
Mie University · JPPearl Science Laboratory · JP

Funding

Japan Society for the Promotion of Science 24658183
6 · The paper itself

Abstract

The nacreous layer of shells and pearls is composed of aragonite crystals arranged in an organic matrix. The organic matrix contains chitin and several proteins that regulate the formation of the nacreous layer. Owing to their strong interactions in the organic matrix, the current method for extraction of insoluble proteins from the pre-powdered nacreous layer involves heating to high temperatures in the presence of a detergent (e.g., sodium dodecyl sulfate, SDS) and reductant (e.g., dithiothreitol, DTT), which is likely to induce protein degradation. Therefore, we have developed an electroextraction method to isolate proteins from the organic matrix of a nacreous organic sheet, that was obtained following the decalcification of shells in their original shape. Our electroextraction method employs milder conditions without heating or detergent. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) patterns of the electro-extracted proteins (EEPs) under non-reduced and reduced conditions revealed that this method yielded a greater number of different proteins compared with the conventional extraction method and the isolated EEPs retained their disulfide bonds. Our method is able to easily extract insoluble proteins from the nacreous layer under mild conditions and will undoubtedly aid future analyses into the functions of the nacreous layer proteins.

Indexed as

Electro-extracted proteinselectroextractionheating methodnacreous layerorganic matrixpearl oyster

Identifiers

PMID31164616
PMCPMC6632181
OpenAlexW2945999956

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.