Evidence map›Paper›PMID 31164589›Full record

ArticleMethods and protocols2019

Novel 'Bacteriospray' Method Facilitates the Functional Screening of Metagenomic Libraries for Antimicrobial Activity.

Anissa Brahami, Annie Castonguay, Éric Déziel

Open access · goldAbstract read
In one paragraph

Article in Methods and protocols, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Anissa BrahamiINRS-Institut Armand-Frappier, Laval, QC H7V 1B7, Canada. anissa.brahami@iaf.inrs.ca.
Annie CastonguayINRS-Institut Armand-Frappier, Laval, QC H7V 1B7, Canada. annie.castonguay@iaf.inrs.ca.ORCID 0000-0001-5705-6353
Éric DézielINRS-Institut Armand-Frappier, Laval, QC H7V 1B7, Canada. eric.deziel@iaf.inrs.ca.ORCID 0000-0002-4609-0115
Institut National de la Recherche Scientifique · CA

Funding

Armand-Frappier Foundation Scholarship to A.B.Canada Research Chairs Sociomicrobiology (E.D.)Canadian Institutes of Health Research MOP-142466 (E.D.)Fonds de Recherche du Québec - Santé 31227 (A.C.)
6 · The paper itself

Abstract

Metagenomic techniques, notably the cloning of environmental DNA (eDNA) into surrogate hosts, have given access to the genome of uncultured bacteria. However, the determination of gene functions based on DNA sequences alone remains a significant challenge. The functional screening of metagenomic libraries represents an interesting approach in the discovery of microbial metabolites. We describe here an optimized screening approach that facilitates the identification of new antimicrobials among large metagenomic libraries. Notably, we report a detailed genomic library construction protocol using

Indexed as

antibioticbacterial spraylibrary constructionoptimization

Identifiers

PMID31164589
PMCPMC6481063
OpenAlexW2907936972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.