Evidence map›Paper›PMID 31164580›Full record

ArticleMethods and protocols2018

Build Your Own Microscope: Step-By-Step Guide for Building a Prism-Based TIRF Microscope.

Dalton R Gibbs, Anisa Kaur, Anoja Megalathan, Kumar Sapkota, Soma Dhakal

Abstract read
In one paragraph

Article in Methods and protocols, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Single-Molecule FRET-Based Multiplexed Detection.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  7. Article
  8. Using Single-Molecule FRET to Evaluate DNA Nanodevices at Work.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Single-Step FRET-Based Detection of Femtomoles DNA.Sensors (Basel, Switzerland) · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dalton R GibbsDepartment of Chemistry, Virginia Commonwealth University, 1001 West Main Street, Richmond, VA 23284, USA. gibbsdr@vcu.edu.ORCID 0000-0001-7314-2710
Anisa KaurDepartment of Chemistry, Virginia Commonwealth University, 1001 West Main Street, Richmond, VA 23284, USA. kaura2@vcu.edu.
Anoja MegalathanDepartment of Chemistry, Virginia Commonwealth University, 1001 West Main Street, Richmond, VA 23284, USA. megalathana@vcu.edu.
Kumar SapkotaDepartment of Chemistry, Virginia Commonwealth University, 1001 West Main Street, Richmond, VA 23284, USA. sapkotak@vcu.edu.
Soma DhakalDepartment of Chemistry, Virginia Commonwealth University, 1001 West Main Street, Richmond, VA 23284, USA. sndhakal@vcu.edu.ORCID 0000-0002-3734-139X

Funding

Virginia Commonwealth University StartUp
6 · The paper itself

Abstract

Prism-based total internal reflection fluorescence (pTIRF) microscopy is one of the most widely used techniques for the single molecule analysis of a vast range of samples including biomolecules, nanostructures, and cells, to name a few. It allows for excitation of surface bound molecules/particles/quantum dots via evanescent field of a confined region of space, which is beneficial not only for single molecule detection but also for analysis of single molecule dynamics and for acquiring kinetics data. However, there is neither a commercial microscope available for purchase nor a detailed guide dedicated for building this microscope. Thus far, pTIRF microscopes are custom-built with the use of a commercially available inverted microscope, which requires high level of expertise in selecting and handling sophisticated instrument-parts. To directly address this technology gap, here we describe a step-by-step guide on how to build and characterize a pTIRF microscope for in vitro single-molecule imaging, nanostructure analysis and other life sciences research.

Indexed as

fluorescence microscopepTIRFsingle-molecule detectionsingle-molecule FRET

Identifiers

PMID31164580
PMCPMC6481079

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.