Evidence map›Paper›PMID 31164154›Full record

ArticleEpigenetics & chromatin2019

Phosphorylation of TET2 by AMPK is indispensable in myogenic differentiation.

Ting Zhang, Xiaowen Guan, Un Lam Choi, Qiang Dong, Melody M T Lam, Jianming Zeng, Jun Xiong, Xianju Wang, Terence C W Poon, Hongjie Zhang and 5 more

Open access · goldAbstract read
In one paragraph

Article in Epigenetics & chromatin, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
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  10. Epigenetic control of skeletal muscle atrophy.Cellular & molecular biology letters · 2024
    Review
  11. Article
  12. Mechanisms that regulate the activities of TET proteins.Cellular and molecular life sciences : CMLS · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Ting ZhangFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Xiaowen GuanFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Un Lam ChoiFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Qiang DongNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.
Melody M T LamFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Jianming ZengFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Jun XiongNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.
Xianju WangFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Terence C W PoonFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Hongjie ZhangFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Xuanjun ZhangFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Hailin WangThe State Key Laboratory of Environmental Chemistry and Ecotoxicology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China.
Ruiyu XieFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau.
Bing ZhuNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.
Gang LiFaculty of Health Sciences, University of Macau, Avenida da Universidade, Taipa, Macau. gangli@um.edu.mo.
University of Macau · MOChinese Academy of Sciences · CNInstitute of Biophysics · CNResearch Center for Eco-Environmental Sciences · CNUniversity of Chinese Academy of Sciences · CN

Funding

Fundo para o Desenvolvimento das Ciências e da Tecnologia 095/2015/A3Fundo para o Desenvolvimento das Ciências e da Tecnologia 137/2014/A3National Natural Science Foundation of China 31761163001NSFC-FDCT 033/2017/AFJResearch & Development Administration Office of the University of Macau MYRG201700099Research & Development Administration Office of the University of Macau MYRG2018-00022
6 · The paper itself

Abstract

backgroundTET-mediated oxidation of 5-mC participates in both passive and active DNA demethylation, which exerts a significant influence on diverse biological processes. Mass spectrometry has identified multiple phosphorylation sites of TET2. However, the functions of these phosphosites and their corresponding kinases are mostly unknown.

resultsHere, we showed that AMP-activated protein kinase (AMPK) phosphorylates murine TET2 at the serine residue 97 (S97), and the phosphorylation enhances TET2 stability through promoting its binding to 14-3-3β. AMPK ablation resulted in decreased global 5-hmC levels at the myotube stages, severe differentiation defects of C2C12 cells and significantly, total loss of expression of Pax7. Genome-wide analyses revealed increased DNA methylation at genic and enhancer regions of AMPK-null myoblasts and myotubes. Using CRISPR/Cas9 technology, we showed that a novel enhancer, which is hypermethylated in AMPK-null cells, regulates Pax7 expression. The phospho-mimicking mutant, TET2-S97E, could partly rescue the differentiation defect in AMPK-ablated C2C12 cells.

conclusionsTogether, our data demonstrated that AMPK is a critical regulator of myogenesis, partly through phosphorylating TET2.

Indexed as

14-3-3 ProteinsAMP-Activated Protein KinasesAnimalsCell DifferentiationDioxygenasesDNA-Binding ProteinsDNA MethylationGene Knockout TechniquesGenome-Wide Association StudyHEK293 CellsHumansMiceMuscle DevelopmentMuscle Fibers, SkeletalMusclesMyoblasts14-3-3 ProteinsAMP-Activated Protein KinasesDioxygenasesDNA-Binding ProteinsPAX7 protein, humanPax7 protein, mousePAX7 Transcription FactorProto-Oncogene ProteinsTET2 protein, humanTet2 protein, mouseAMPKMyogenesisPAX7PhosphorylationTET2

Identifiers

PMID31164154
PMCPMC6547497
OpenAlexW2948682707

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.