Evidence map›Paper›PMID 31162049›Full record

ArticleeLife2019

Disentangling strictly self-serving mutations from win-win mutations in a mutualistic microbial community.

Samuel Frederick Mock Hart, Jose Mario Bello Pineda, Chi-Chun Chen, Robin Green, Wenying Shou

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Extracellular Metabolism Sets the Table for Microbial Cross-Feeding.Microbiology and molecular biology reviews : MMBR · 2021
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. The microbial exometabolome: ecological resource and architect of microbial communities.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Samuel Frederick Mock Hart *Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, United States.ORCID 0000-0002-5068-2199
Jose Mario Bello Pineda *Division of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, United States.ORCID 0000-0003-1417-9200
Chi-Chun ChenDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, United States.ORCID 0000-0002-5621-2008
Robin GreenDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, United States.
Wenying ShouDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, Seattle, United States.ORCID 0000-0001-5693-381X
Fred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
University of Washington Medical Scientist Training Program: MD/PhDT32GM007266 · NIGMS · UNIVERSITY OF WASHINGTON · PI HORWITZ, MARSHALL S. · 1985 to 2023
$30.4M
Cellular Cooperation and Cheating: an Experimental and Mathematical AnalysisDP2OD006498 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI SHOU, WENYING · 2009 to 2009
$2.6M
Diversity Action Plan: UW GenOM ProjectR25HG007153 · NHGRI · UNIVERSITY OF WASHINGTON · PI EICHLER, EVAN · 2013 to 2020
$2.3M
Understanding Robustness of a Cooperative Microbial Community during EvolutionR01GM124128 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI XIE, LI · 2017 to 2020
$1.4M
FHCRC High-Performance Computing ClusterS10OD020069 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI KOOPERBERG, CHARLES L · 2015 to 2015
$600k
NCI NIH HHS P30 CA015704NHGRI NIH HHS R25 HG007153NIGMS NIH HHS R01 GM124128NIGMS NIH HHS T32 GM007266NIH HHS 5R25HG007153-07NIH HHS DP2 OD006498NIH HHS DP2 OD006498-01NIH HHS R01GM124128NIH HHS S10 OD020069
6 · The paper itself

Abstract

Mutualisms can be promoted by pleiotropic win-win mutations which directly benefit self (self-serving) and partner (partner-serving). Intuitively, partner-serving phenotype could be quantified as an individual's benefit supply rate to partners. Here, we demonstrate the inadequacy of this thinking, and propose an alternative. Specifically, we evolved well-mixed mutualistic communities where two engineered yeast strains exchanged essential metabolites lysine and hypoxanthine. Among cells that consumed lysine and released hypoxanthine, a chromosome duplication mutation seemed win-win: it improved cell's affinity for lysine (self-serving), and increased hypoxanthine release rate per cell (partner-serving). However, increased release rate was due to increased cell size accompanied by increased lysine utilization per birth. Consequently, total hypoxanthine release rate per lysine utilization (defined as 'exchange ratio') remained unchanged. Indeed, this mutation did not increase the steady state growth rate of partner, and is thus solely self-serving during long-term growth. By extension, reduced benefit production rate by an individual may not imply cheating.

Indexed as

Microbial InteractionsMutationSymbiosisHypoxanthineLysineYeastsHypoxanthineLysinebenefitcostecologyevolutionevolutionary biologymutualismpartner-servingS. cerevisiae

Identifiers

PMID31162049
PMCPMC6548503
OpenAlexW2952138780

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.