Evidence map›Paper›PMID 31161353›Full record

ArticleBiomechanics and modeling in mechanobiology2019

Effect of collagenase-gelatinase ratio on the mechanical properties of a collagen fibril: a combined Monte Carlo-molecular dynamics study.

Bethany Powell, David C Malaspina, Igal Szleifer, Yasin Dhaher

Open access · hybridAbstract read
In one paragraph

Article in Biomechanics and modeling in mechanobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Bethany PowellDepartment of Mechanical Engineering and Bioengineering, Valparaiso University, Valparaiso, IN, USA.
David C MalaspinaInstitut de Ciencia de Materials de Barcelona (ICMAB-CSIC), Campus UAB, Bellaterra, Barcelona, Spain.
Igal SzleiferDepartment of Biomedical Engineering, Northwestern University, Evanston, IL, USA.
Yasin DhaherDepartment of Physical Medicine and Rehabilitation, University of Texas Southwestern, Dallas, TX, USA. yasin.dhaher@utsouthwestern.edu.
Institut de Ciència de Materials de Barcelona · ESNorthwestern University · USThe University of Texas Southwestern Medical Center · USValparaiso University · US

Funding

National Institute of Biomedical Imaging and Bioengineering (US) 1U01 EB015410-01A1NIH HHS T32 HD07418
6 · The paper itself

Abstract

Loading in cartilage is supported primarily by fibrillar collagen, and damage will impair the function of the tissue, leading to pathologies such as osteoarthritis. Damage is initiated by two types of matrix metalloproteinases, collagenase and gelatinase, that cleave and denature the collagen fibrils in the tissue. Experimental and modeling studies have revealed insights into the individual contributions of these two types of MMPs, as well as the mechanical response of intact fibrils and fibrils that have experienced random surface degradation. However, no research has comprehensively examined the combined influences of collagenases and gelatinases on collagen degradation nor studied the mechanical consequences of biological degradation of collagen fibrils. Such preclinical examinations are required to gain insights into understanding, treating, and preventing degradation-related cartilage pathology. To develop these insights, we use sequential Monte Carlo and molecular dynamics simulations to probe the effect of enzymatic degradation on the structure and mechanics of a single collagen fibril. We find that the mechanical response depends on the ratio of collagenase to gelatinase-not just the amount of lost fibril mass-and we provide a possible mechanism underlying this phenomenon. Overall, by characterizing the combined influences of collagenases and gelatinases on fibril degradation and mechanics at the preclinical research stage, we gain insights that may facilitate the development of targeted interventions to prevent the damage and loss of mechanical integrity that can lead to cartilage pathology.

Indexed as

Molecular Dynamics SimulationMonte Carlo MethodBiomechanical PhenomenaCollagenasesFibrillar CollagensGelatinasesStress, MechanicalTropocollagenCollagenasesFibrillar CollagensGelatinasesTropocollagenCollagenaseCollagen fibrilGelatinaseMechanical propertiesMolecular dynamicsMonte Carlo

Identifiers

PMID31161353
PMCPMC6825035
OpenAlexW2948816540

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.