Evidence map›Paper›PMID 31160752›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2019

Reporting of race in genome and exome sequencing studies of cancer: a scoping review of the literature.

Adrienne Nugent, Kelly R Conatser, Llaran L Turner, James T Nugent, Esther May B Sarino, Luisel J Ricks-Santi

Abstract readScoping Review
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  7. Inference of Genetic Ancestry from Cancer-Derived Molecular Data with RAIDS.Methods in molecular biology (Clifton, N.J.) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Adrienne NugentCancer Research Center, Hampton University, Hampton, VA, USA. adrienne.nugent@hamptonu.edu.ORCID http://orcid.org/0000-0002-1818-2098
Kelly R ConatserGraduate Programs in Public Health, University of New England, Portland, ME, USA.ORCID http://orcid.org/0000-0001-5904-6714
Llaran L TurnerCancer Research Center, Hampton University, Hampton, VA, USA.
James T NugentDepartment of Pediatrics, Joint Base Langley-Eustis, Hampton, VA, USA.
Esther May B SarinoEdward E. Brickell Medical Sciences Library, Eastern Virginia Medical School, Norfolk, VA, USA.
Luisel J Ricks-SantiCancer Research Center, Hampton University, Hampton, VA, USA. luisel.rickssanti@hamptonu.edu.

Funding

The Hampton University regional Transdisciplinary Collaborative CenterU54MD008621 · NIMHD · HAMPTON UNIVERSITY · PI SAMUEL, RAYMOND E · 2013 to 2017
$13.5M
Sociobiological Responses to Stress in Prostate Cancer SurvivorsU54MD010706 · NIMHD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MELVIN, CATHY LEE · 2016 to 2020
$8.0M
Functional analysis of genetic variants in African Americans with Breast CancerR15CA239100 · NCI · HAMPTON UNIVERSITY · PI MCDONALD, JOHN TYSON, RICKS-SANTI, LUISEL J. · 2019 to 2019
$444k
NCI NIH HHS R15 CA239100NIMHD NIH HHS U54 MD008621NIMHD NIH HHS U54 MD010706
6 · The paper itself

Abstract

purposeMinorities are often underrepresented in clinical cancer research yet the frequency of reporting of race in genomic sequencing studies of cancer is unknown. This scoping review determines the rate at which race is reported as a demographic variable, the factors associated with reporting of race, and the participation rates of minority populations.

methodsPubMed was systematically searched from 1 January 2010 through 15 November 2018 and 11,014 studies were assessed for eligibility. Publications reporting genome or exome sequencing data for patients with one of the ten most common cancers in the United States were included.

resultsA total of 231 publications containing sequencing data from 15,721 unique patients met inclusion criteria. Race was reported in 37% of studies compared with 84% of studies reporting age and 85% reporting gender. Reporting of race was associated with cohort size, sequencing method, familial cancer, cancers with disparities, and reporting of age and gender. Minority populations were significantly underpowered to detect recurrent pathogenic variants in most cancers.

conclusionRace is underreported as a demographic variable in genomic sequencing studies of cancer. Substantially increased efforts are needed to sequence patients from underrepresented populations to reduce health disparities in patients of non-European ancestry.

Indexed as

Chromosome MappingDatabases, GeneticEthnicityExomeExome SequencingFemaleHumansMaleMinority GroupsNeoplasmsRacial GroupsResearch DesignUnited Statescancerdisparitiesexome sequencinggenome sequencingrace

Identifiers

PMID31160752
PMCPMC6891161

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.