Evidence map›Paper›PMID 31160600›Full record

ArticleNature communications2019

DHX36 prevents the accumulation of translationally inactive mRNAs with G4-structures in untranslated regions.

Markus Sauer, Stefan A Juranek, James Marks, Alessio De Magis, Hinke G Kazemier, Daniel Hilbig, Daniel Benhalevy, Xiantao Wang, Markus Hafner, Katrin Paeschke

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 190 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. G-Quadruplexes: Structural Diversity and Emerging Roles in Biomolecular Condensation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Regulation of RNA-binding proteins by small biomolecules.Nature reviews. Molecular cell biology · 2026
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
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51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Markus SauerDepartment of Biochemistry, Biocenter, University of Würzburg, 97074, Würzburg, Germany.
Stefan A JuranekDepartment of Oncology, Hematology and Rheumatology, University Hospital Bonn, 53127, Bonn, Germany.
James MarksLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, NIH, Bethesda, MD, 20892, USA.
Alessio De MagisDepartment of Oncology, Hematology and Rheumatology, University Hospital Bonn, 53127, Bonn, Germany.
Hinke G KazemierEuropean Research Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen, University of Groningen, 9713 AV, Groningen, The Netherlands.
Daniel HilbigDepartment of Oncology, Hematology and Rheumatology, University Hospital Bonn, 53127, Bonn, Germany.
Daniel BenhalevyLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, NIH, Bethesda, MD, 20892, USA.ORCID http://orcid.org/0000-0001-6998-1933
Xiantao WangLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, NIH, Bethesda, MD, 20892, USA.
Markus HafnerLaboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, NIH, Bethesda, MD, 20892, USA. markus.hafner@nih.gov.ORCID http://orcid.org/0000-0002-4336-6518
Katrin PaeschkeDepartment of Biochemistry, Biocenter, University of Würzburg, 97074, Würzburg, Germany. katrin.paeschke@ukbonn.de.ORCID http://orcid.org/0000-0003-3080-6745
National Institute of Arthritis and Musculoskeletal and Skin Diseases · USUniversity Hospital Bonn · DEUniversity Medical Center Groningen · NL

Funding

Impact of RNA binding proteins on translation initiation and elongation.ZIAAR041206 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI HAFNER, MARKUS · 2016 to 2025
$5.5M
Integration of the results from systems-level determination of cis-acting elements into high-resolution maps of posttranscriptional regulatory events.ZIAAR041205 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI HAFNER, MARKUS · 2016 to 2025
$5.5M
Deutsche Forschungsgemeinschaft (German Research Foundation) EXC2151 - 390873048EC | EU Framework Programme for Research and Innovation H2020 | H2020 Euratom (H2020 Euratom Research and Training Programme 2014-2018) 638988-G4DSB
6 · The paper itself

Abstract

Translation efficiency can be affected by mRNA stability and secondary structures, including G-quadruplex structures (G4s). The highly conserved DEAH-box helicase DHX36/RHAU resolves G4s on DNA and RNA in vitro, however a systems-wide analysis of DHX36 targets and function is lacking. We map globally DHX36 binding to RNA in human cell lines and find it preferentially interacting with G-rich and G4-forming sequences on more than 4500 mRNAs. While DHX36 knockout (KO) results in a significant increase in target mRNA abundance, ribosome occupancy and protein output from these targets decrease, suggesting that they were rendered translationally incompetent. Considering that DHX36 targets, harboring G4s, preferentially localize in stress granules, and that DHX36 KO results in increased SG formation and protein kinase R (PKR/EIF2AK2) phosphorylation, we speculate that DHX36 is involved in resolution of rG4 induced cellular stress.

Indexed as

G-QuadruplexesUntranslated RegionsDEAD-box RNA HelicaseseIF-2 KinaseGene Knockout TechniquesHEK293 CellsHumansPhosphorylationProtein BiosynthesisRibosomesRNA, MessengerStress, PhysiologicalDEAD-box RNA HelicasesDHX36 protein, humanEIF2AK2 protein, humaneIF-2 KinaseRNA, MessengerUntranslated Regions

Identifiers

PMID31160600
PMCPMC6547686
OpenAlexW2948768009

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.