Evidence map›Paper›PMID 31159886›Full record

ArticleMicrobial cell factories2019

Towards semi-synthetic microbial communities: enhancing soy sauce fermentation properties in B. subtilis co-cultures.

Rachatida Det-Udom, Charlie Gilbert, Long Liu, Cheunjit Prakitchaiwattana, Tom Ellis, Rodrigo Ledesma-Amaro

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The microbial food revolution.Nature communications · 2023
    Review
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Rachatida Det-UdomCentre for Synthetic Biology, Imperial College London, London, SW7 2AZ, UK.
Charlie GilbertCentre for Synthetic Biology, Imperial College London, London, SW7 2AZ, UK.
Long LiuKey Laboratory of Industrial Biotechnology, Ministry of Education, Jiangnan University, Wuxi, 214122, China.
Cheunjit PrakitchaiwattanaDepartment of Food Technology, Faculty of Science, Chulalongkorn University, Patumwan, Bangkok, 10330, Thailand.
Tom EllisCentre for Synthetic Biology, Imperial College London, London, SW7 2AZ, UK.
Rodrigo Ledesma-AmaroCentre for Synthetic Biology, Imperial College London, London, SW7 2AZ, UK. r.ledesma-amaro@imperial.ac.uk.ORCID http://orcid.org/0000-0003-2631-5898
Imperial College London · GBChulalongkorn University · THJiangnan University · CN

Funding

Biotechnology and Biological Sciences Research Council BB/R01602X/1Newton Fund GA/PhD/Scholar/Year3/009Thailand Research Fund PHD57I0069
6 · The paper itself

Abstract

backgroundMany fermented foods and beverages are produced through the action of complex microbial communities. Synthetic biology approaches offer the ability to genetically engineer these communities to improve the properties of these fermented foods. Soy sauce is a fermented condiment with a vast global market. Engineering members of the microbial communities responsible for soy sauce fermentation may therefore lead to the development of improved products. One important property is the colour of soy sauce, with recent evidence pointing to a consumer preference for more lightly-coloured soy sauce products for particular dishes.

resultsHere we show that a bacterial member of the natural soy sauce fermentation microbial community, Bacillus, can be engineered to reduce the 'browning' reaction during soy sauce production. We show that two approaches result in 'de-browning': engineered consumption of xylose, an important precursor in the browning reaction, and engineered degradation of melanoidins, the major brown pigments in soy sauce. Lastly, we show that these two strategies work synergistically using co-cultures to result in enhanced de-browning.

conclusionsOur results demonstrate the potential of using synthetic biology and metabolic engineering methods for fine-tuning the process of soy sauce fermentation and indeed for many other natural food and beverage fermentations for improved products.

Indexed as

FermentationSoy FoodsBacillus subtilisCoculture TechniquesGlycine maxIndustrial MicrobiologyMetabolic EngineeringMicrobiotaPolymersSynthetic BiologyXylosemelanoidin polymersPolymersXyloseIndustrial microbiomeMetabolic engineeringSoy sauceSynthetic biologySynthetic microbial communities

Identifiers

PMID31159886
PMCPMC6547557
OpenAlexW2948357324

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.