Evidence map›Paper›PMID 31159738›Full record

ArticleBMC plant biology2019

A family of auxin conjugate hydrolases from Solanum lycopersicum and analysis of their roles in flower pedicel abscission.

Xin Fu, Zihang Shi, Yun Jiang, Lingling Jiang, Mingfang Qi, Tao Xu, Tianlai Li

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Xin FuHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China.
Zihang ShiHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China.
Yun JiangHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China.
Lingling JiangShenyang Entry-exit Inspection and Quarantine Bureau, No.433 Danan street, Shenhe District, Shenyang, 110016, Liaoning, China.
Mingfang QiHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China.
Tao XuHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China. syauxutao@qq.com.
Tianlai LiHorticulture Department, Shenyang Agricultural University, No. 120 Dongling Road, Shenhe District, Shenyang, 110866, Liaoning, China. 15702414552@163.com.
Shenyang Agricultural University · CNShenyang Environmental Protection Bureau · CN

Funding

Cultivation Plan for Youth Agricultural Science and Technology Innovative Talents of Liaoning Province No. 2014051National Natural Science Foundation of China Nos. 31672197 and 31572167Nation Natural Science Foundation of China U1708232the National Key Research and Development Program of China 2018YFD1000800
6 · The paper itself

Abstract

backgroundAuxin conjugates are hydrolyzed to release free auxin to ensure defined cellular auxin levels or gradients within tissues for proper development or response to environmental signals. The auxin concentration in the abscission zone (AZ) is thought to play an important role in mediating the abscission lag phase.

resultsIn this study, the full cDNA sequences of seven tomato ILR1-like SlILL genes were identified and characterized, All SlILLs were found to have auxin conjugate hydrolysis activity. The effects of different auxin conjugates on abscission identified IAA-Ile as a candidate to determine the auxin conjugate and auxin conjugate hydrolysis functions in abscission. Treatment of pedicel explants with IAA-Ile for different times showed that application before 6 h could effectively delay abscission. IAA-Ile pre-incubation for 2 h was sufficient to inhibit abscission. These results showed that there is not sufficient auxin conjugates in the AZ to inhibit abscission, and the optimal time to inhibit abscission by the application of exogenous auxin conjugates is before 6 h. Treatment with cycloheximide (CHX, a protein biosynthesis inhibitor) indicated that de novo synthesis of auxin conjugate hydrolases is also required to delay abscission. During abscission, SlILL1, 5, and 6 showed abscission-related gene expression patterns, and SlILL1, 3, 5, 6, and 7 showed increasing expression trends, which collectively might contribute to delay abscission. Silencing the expression of SlILL1, 3, 5, 6, and 7 using virus-induced gene silencing showed that SlILL1, 5, and 6 are major mediators of abscission in tomato.

conclusionsIn the process of abscission, auxin inhibition is concentration dependent, and the concentration of auxin in the AZ was regulated by hydrolyzed auxin conjugates. SlILR1, 5, and 6 play a key role in flower pedicel abscission.

Indexed as

Gene Expression Regulation, PlantCycloheximideFlowersHydrolasesIndoleacetic AcidsProtein Synthesis InhibitorsSolanum lycopersicumCycloheximideHydrolasesIndoleacetic AcidsProtein Synthesis InhibitorsAuxin conjugate hydrolasesFlower pedicel abscissionIndole-3-acetic acidSolanum lycopersicum

Identifiers

PMID31159738
PMCPMC6547480
OpenAlexW2948979402

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.