Evidence map›Paper›PMID 31159152›Full record

ArticleInternational journal of molecular sciences2019

Identification of Potential Novel Interacting Partners for Coagulation Factor XIII B (FXIII-B) Subunit, a Protein Associated with a Rare Bleeding Disorder.

Sneha Singh, Mohammad Suhail Akhter, Johannes Dodt, Peter Volkers, Andreas Reuter, Christoph Reinhart, Christoph Krettler, Johannes Oldenburg, Arijit Biswas

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sneha SinghInstitute of Experimental Hematology and Transfusion Medicine, University Clinic Bonn, 53127 Bonn, Germany. Sneha.Gupta@ukbonn.de.
Mohammad Suhail AkhterInstitute of Experimental Hematology and Transfusion Medicine, University Clinic Bonn, 53127 Bonn, Germany. suhailaiims@gmail.com.
Johannes DodtPaul-Ehrich Institute, 63225 Langen, Germany. Johannes.Dodt@pei.de.ORCID 0000-0002-1078-8298
Peter VolkersPaul-Ehrich Institute, 63225 Langen, Germany. Peter.Volkers@pei.de.
Andreas ReuterPaul-Ehrich Institute, 63225 Langen, Germany. Andreas.Reuter@pei.de.ORCID 0000-0002-6082-9000
Christoph ReinhartDepartment of Molecular Membrane Biology, Max-Planck Institute for Biophysics, Max-Von Laue Str 3, 60438 Frankfurt am Main, Germany. christoph.reinhart@biophys.mpg.de.
Christoph KrettlerDepartment of Molecular Membrane Biology, Max-Planck Institute for Biophysics, Max-Von Laue Str 3, 60438 Frankfurt am Main, Germany. christoph.krettler@biophys.mpg.de.
Johannes OldenburgInstitute of Experimental Hematology and Transfusion Medicine, University Clinic Bonn, 53127 Bonn, Germany. johannes.oldenburg@ukbonn.de.
Arijit BiswasInstitute of Experimental Hematology and Transfusion Medicine, University Clinic Bonn, 53127 Bonn, Germany. arijit.biswas@ukb.uni-bonn.de.ORCID 0000-0002-4103-5854
Paul Ehrlich Institut · DEMax Planck Institute of Biophysics · DEJazan University · SA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coagulation factor XIII (FXIII) is a plasma-circulating heterotetrameric pro-transglutaminase complex that is composed of two catalytic FXIII-A and two protective/regulatory FXIII-B subunits. FXIII acts by forming covalent cross-links within a preformed fibrin clots to prevent its premature fibrinolysis. The FXIII-A subunit is known to have pleiotropic roles outside coagulation, but the FXIII-B subunit is a relatively unexplored entity, both structurally as well as functionally. Its discovered roles so far are limited to that of the carrier/regulatory protein of its partner FXIII-A subunit. In the present study, we have explored the co-presence of protein excipients in commercial FXIII plasma concentrate FibrogamminP by combination of protein purification and mass spectrometry-based verification. Complement factor H was one of the co-excipients observed in this analysis. This was followed by performing pull down assays from plasma in order to detect the putative novel interacting partners for the FXIII-B subunit. Complement system proteins, like complement C3 and complement C1q, were amongst the proteins that were pulled down. The only protein that was observed in both experimental set ups was alpha-2-macroglobulin, which might therefore be a putative interacting partner of the FXIII/FXIII-B subunit. Future functional investigations will be needed to understand the physiological significance of this association.

Indexed as

Protein Interaction MappingBlood CoagulationBlood Coagulation DisordersCarrier ProteinsComplement Factor HFactor XIIIFibrinogenHumansMass SpectrometryPregnancy-Associated alpha 2-MacroglobulinsProtein BindingCarrier ProteinsComplement Factor HFactor XIIIfactor XIIIbFibrinogenPregnancy-Associated alpha 2-Macroglobulinscomplement systemexcipientsFactor XIIIFXIII deficiencymass spectrometrypleiotropy

Identifiers

PMID31159152
PMCPMC6600159
OpenAlexW2947896492

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.